| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1782 |
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| Symbol | |
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| ID | 4687542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1896383 |
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| End bp | 1898089 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834788 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_982013 |
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| Protein GI | 121604684 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00942707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00166873 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTGA TAGATATTCA AGTCCCTGAC ATTGGGGACT TTGACGAAGT AACGGTTATT
GAACTGCTGG TCAAGCCCGG CGACACCGTG ACGGCCGAGC AGTCGCTCAT CACGGTCGAG
TCCGACAAGG CCTCGATGGA AATCCCGTCC AGCCACGCCG GCGTGGTCAA GGAGATCAAG
GTCAAGCTCG ACGACAAGGT CAAGCAGGGC TCGGTCGTGC TGACGCTGGA CGTGGCGGGC
GCCGCAGAAT CGGAGCCAAA ACAGGCTCCT GCGCAGGCTG CACCTGCACC GGCAGCTATT
AAAACAGAAG CGCCTGCTGC GACTGTCGCA ATTGCTTCGG CGCCCGCCCC GGCGGCCAGC
GGCCCGGTGG AAGTGCGGGT TCCCGACATT GGCGACTTCA AGGATGTGGT CGTGATCGAG
GTGCTGGTCA AGCCCGGCGA CAGCATCAAG GCCGAGCAGT CGCTGGTTAC CGTGGAATCC
GACAAGGCCT CCATGGAGAT TCCGTCCTCC ACGGCCGGCG TGCTCAAGGA ACTCAAGGTC
AAGCTGGGCG ACACCGTCAA TATTGGCGAC CTGCTGGCCA TCCTGGAAGG CTCGGCCGCG
CCCGCAGCAG CCGTTCCTGC TTCTGCTCCG GCGGCACCCG CCGCAGCGGC TGCTGCACCA
GCGGCGGCTG CCACGGCATC CGCACCCGCA GCGCCTGCGC CAGCCGCAGC CGCAGCCGCC
CAGGCCTTGC CCGCGCATGA ACCCACGGCA ACACCCGCAA CCGGCCTGCC GCATGCGTCG
CCCTCGGTGC GCAAGTTCGC CCGTGAACTG GGTGTGCCGC TGGCCGAACT CAAGGGCACA
GGCCCCAAGG GCCGCATCAC GCTGGACGAT GTGCAGGACT TCACCAAAGC GGTGATGGCC
GGCGACACCC GCACCCAGGC GCAGGTGGCC AAGGCGCCAG CGCCTGCCGC CAGCAGCGGC
GGCACGGGCG CAGGTCTTGA CCTGCTGCCG TGGCCAAAGG TCGATTTCAC CAAGTTCGGC
CCGGTCGAGC GCCAGCCGCT GCCCCGCATC AAGAAGATCA GCGGCGCCAA CCTGCACCGC
AACTGGGTGA TGATTCCGCA CGTCTGCAAC CATGACGACG CGGACATCAC CGAACTCGAA
GCCTTCCGCG TGCAGATGAA CAAGGAAAAC GAGAAGTCCG GTGTCAAGAT CACCATGCTG
GCCTTCCTGA TCAAGGCCTC GGTGGCAGCG CTCAAGAAAT TCCCGCAGTT CAACGCCTCG
CTCGACGGCG ACCAGCTGGT GCTCAAGCAG TATTTCAATA TTGCCTTTGC CGCCGACACA
CCGAACGGCC TGGTCGTTCC GGTGATCAAG GACGCCGACA AGAAAGGCAT CATCCAGATC
TCGCAAGAGA TGGGCGAGCT GGCCAAGAAA GCGCGCGATG GCAAGCTCAG TCCGGCCGAC
ATGCAGGGCG CCTGCTTCAC GATTTCGTCG CTGGGCGGCA TTGGCGGGCG TTATTTCACG
CCCATCATCA ATGCGCCCGA AGTCGCCATC TTGGGCGTGT GCAAGAGCCG CATCGAGCCC
GTCTGGGACG GCAAGGCCTT CCAGCCGCGC CTGATGCAGC CGATGAGCCT GAGCTGGGAC
CACCGCGTGA TCGATGGCGC GGCGGCGGCG CGTTTCAATG CTTACTTTGG CCAGGTTCTG
GCGGATTTCC GCCGTATTTT CCTGTGA
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| Protein sequence | MALIDIQVPD IGDFDEVTVI ELLVKPGDTV TAEQSLITVE SDKASMEIPS SHAGVVKEIK
VKLDDKVKQG SVVLTLDVAG AAESEPKQAP AQAAPAPAAI KTEAPAATVA IASAPAPAAS
GPVEVRVPDI GDFKDVVVIE VLVKPGDSIK AEQSLVTVES DKASMEIPSS TAGVLKELKV
KLGDTVNIGD LLAILEGSAA PAAAVPASAP AAPAAAAAAP AAAATASAPA APAPAAAAAA
QALPAHEPTA TPATGLPHAS PSVRKFAREL GVPLAELKGT GPKGRITLDD VQDFTKAVMA
GDTRTQAQVA KAPAPAASSG GTGAGLDLLP WPKVDFTKFG PVERQPLPRI KKISGANLHR
NWVMIPHVCN HDDADITELE AFRVQMNKEN EKSGVKITML AFLIKASVAA LKKFPQFNAS
LDGDQLVLKQ YFNIAFAADT PNGLVVPVIK DADKKGIIQI SQEMGELAKK ARDGKLSPAD
MQGACFTISS LGGIGGRYFT PIINAPEVAI LGVCKSRIEP VWDGKAFQPR LMQPMSLSWD
HRVIDGAAAA RFNAYFGQVL ADFRRIFL
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