| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1764 |
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| Symbol | |
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| ID | 4686134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1873138 |
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| End bp | 1874325 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834770 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_981995 |
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| Protein GI | 121604666 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0760034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTAC AAAAGCAGCG CATCACCGTC CTCGGCTCGA CCGGCTCCAT CGGCGTCAGC
ACCCTGGATG TGATTGCCCG CCATCCCGAT CGCTTTGAGG TGTTTGCCCT CAGCGCTGCC
ACCCAGGTTG ATCTGATGCT GGCGCAATGC GCGAAGTTCA AGCCGCGGTT CGCCGTGATG
GTGAGCGAGC CCCATGCGCG CCTGCTGGCG GAAAAAATCA AGGCAAATGG GCTGTCTGCG
CAGGTACTGT ATGCACAAGA TGCTCTTGAA ATGATAGCAT CTCATGATTC CGTGGATGCG
GTGATGGCCG CGATTGTGGG CGCTGCCGGC TTGTCGCCGT GCATGGCCGC TGCCCGGGCC
GGAAAGCGCC TGCTGCTGGC CAACAAGGAA GCGCTGGTGG TGGGGGGCGA CGTGTTCATG
CAGGCCGTGC GCGCAGGAGG CGCCAGGCTG CTGCCGATTG ACAGCGAGCA TTCAGCCATT
TTCCAGTCCT TGCCCGACGA CCAGGCAAGC TGGCCGCAAC GGGTTGAAAA AATCATCCTG
ACGGCGTCAG GCGGGCCGTT TCGCACCCGT GAGCCAGCCA GCCTGCGCCA CGTAACGCCC
GACGAAGCCT GCGCGCACCC GAACTGGGTC ATGGGCCGGA AAATTTCGGT CGATTCGGCC
ACCATGATGA ACAAGGCGCT TGAAGTCATC GAGGCCAAAT ACCTGTTTGG CGTGACACCG
GCGCAAATCG AGGTGGTGAT CCATCCGCAG AGCATCATCC ATTCCATGGT GCAGTATTAC
GACACGTCCG TCGTGGCGCA GTTGGGAACA CCCGACATGC GTGTCCCGAT TGCCTACGGC
CTGGCCTGGC CCGAGCGGAT CAGCTCGGGC GCGCAGGCGC TGGACTTCAA AAACCTGGCC
AACATGACGT TTGAAGTGCC CGATGAGGCG CGCTTTCCGG GACTGCGGCT GGCCTGGGAT
GTGCTCAAGG CGCCCGTGGG CAGCACGGCG GTGCTCAATG CAGCCAACGA GATTGCGGTG
GCGGCTTTTC TGGACGGGCG CATCCGCTTT GACCATATTC ATCAGGTGAA TCATGCAACT
CTGGAGGCTG TTTCAGTCTT TGATGTCTTC GATATCGACG GTTTGCTGGC GCTTGACGCC
CAGGCACGCC GCGTAGCAGG TCAAATTGCT GGATGTCTGG AGGGTTGA
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| Protein sequence | MTLQKQRITV LGSTGSIGVS TLDVIARHPD RFEVFALSAA TQVDLMLAQC AKFKPRFAVM
VSEPHARLLA EKIKANGLSA QVLYAQDALE MIASHDSVDA VMAAIVGAAG LSPCMAAARA
GKRLLLANKE ALVVGGDVFM QAVRAGGARL LPIDSEHSAI FQSLPDDQAS WPQRVEKIIL
TASGGPFRTR EPASLRHVTP DEACAHPNWV MGRKISVDSA TMMNKALEVI EAKYLFGVTP
AQIEVVIHPQ SIIHSMVQYY DTSVVAQLGT PDMRVPIAYG LAWPERISSG AQALDFKNLA
NMTFEVPDEA RFPGLRLAWD VLKAPVGSTA VLNAANEIAV AAFLDGRIRF DHIHQVNHAT
LEAVSVFDVF DIDGLLALDA QARRVAGQIA GCLEG
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