Gene Pnap_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1740 
Symbol 
ID4689065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1842594 
End bp1843079 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content55% 
IMG OID639834743 
Productputative transposase 
Protein accessionYP_981973 
Protein GI121604644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.704353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA ACTATTCCGA CGCATTTGTC GAACAAGCCA TCGTCAAGCT GCTTTCCCGT 
GGAGAGCGCA CGATTGAGTC CGTTGCCCAG GAGCTGAACA TCAACTACCA CACAGCCAGG
AACTGGGTCA AAAAAGGAAT GGCAAACAAA GCCGACATTT CGCAGGCAAA GGAAAAGCGC
CTTCAGGATT GGAGTGCCCA GGAGCAACTG CTGGCCTTGC ACGAAACCCA TGGCTTGTCA
GGCGAGGCCC TGCAGGCGTG GTGCCGCGAG CGCGGGTTAT TCGCCCATCA CCTGACGAGC
TGGCAAGCGG CGTTCTGCGC CCCAACGAAA ATGACTTCAG GCACGGGGGA ATTACGCAGT
TTGCAAGATG AAAACGAGCA GCTCAAGCGT GAACTGGTGC GCAAGGAAAA ATCCCTGGCA
GAGGCAGCAG CCTTGCTGAT CCTGCAAAAA AAGTTCCGCG CGCTGTGGGA GGACGAGGTC
AAATGA
 
Protein sequence
MKTNYSDAFV EQAIVKLLSR GERTIESVAQ ELNINYHTAR NWVKKGMANK ADISQAKEKR 
LQDWSAQEQL LALHETHGLS GEALQAWCRE RGLFAHHLTS WQAAFCAPTK MTSGTGELRS
LQDENEQLKR ELVRKEKSLA EAAALLILQK KFRALWEDEV K