Gene Pnap_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1708 
Symbol 
ID4687538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1812715 
End bp1813971 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content65% 
IMG OID639834712 
Producthypothetical protein 
Protein accessionYP_981942 
Protein GI121604613 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAACA ACGCAAACGA TTATGTCATC CGCATCCTGG ATTCGCCGCT GAAGGTCGAT 
GCCGCCGAGT GGAACGCGCT GCTGGCCGCG CAAAGCCTGG ACGGCGTGCT GAACCCGTTC
ATGCGCCACG AATACCTGGC CGCGCTTGAG GCCAGCGGCA GCGCCACGCC GCAAACCGGC
TGGACGCCGC GCTTTGTCAC GCTCTGGCAG GGCGCCACGC TGGCCGGCGC CTGCGCGCTG
TATCTCAAGG CGCACTCCTA CGGCGAATAC GTGTTCGACT GGGCCTGGGC CAATGCCTAC
CAGCAGCACG GCCTGGATTA CTACCCCAAG GCCCTGGTCG CCGTGCCCTT CACGCCCGTT
CCCGGCGCGC GGCTGCTGGC GCGCACTGCG GCCGAGCGAA CGCTGCTGGT CAAGGCGCTG
GTGGCCTGGT GCGAAGCCGA AAAACTGTCA TCGCTGCACC TGCTCTTTGC CAGCGACGAC
GACGTGGCCG CCTGCGAGCA AGCCGGACTG ATGCTGCGCC ACACCGTGCA GTTCCACTGG
ACTGCCCCGC CCGAGGGCTA CCGCGGCTTC GACGCTTTCC TGATGTCCCT GAGCCAGGAA
AAGCGCAAGA AAATCCGCCA GGAGCGGCGC AAGGTGGCGG ACGCCGGCAT CACCTTTCGC
TGGTCGCTGG GCCAGGACAT CAGCCGGGCC GACTGGGATT TTTTCTACCG CTGCTACGAG
CGCACCTACC TGGAGCACGG CAATGCACCG TACCTGAGCC GCGATTTTTT CCGGCGCATG
GAAGCCAGCA TGCCGGAGAA CTGGCTGCTG TTCGTGGCGG AACGCGACGG CGTTGCAGTT
GCTAGCAGTT TGATAGCTGT CAGCGCCCGT CCTGATTGCG CAAATGGCAA AAATGACCCT
GAAAACCGGC CGACCCATGG CCTGACCGCC TATGGCCGCT ACTGGGGCGC GCTGGCCCGG
GTGGACTGCC TGCACTTCGA AGCGTGCTAC TACCAGCCGC TGCAGTGGTG CATTGAGCAC
GGCTTCGAGC GCTTTGAAGG CGGCGCCCAG GGCGAGCACA AGATGGCGCG CGCCCTGCTG
CCGGTCAGGA CCACCAGCGC GCACTGGCTG GCGCATCCTT CGTTTGCTGA CGCCGTCGAG
CGCTTCCTGG AGCGCGAAGG CGCGGGCATC GACAATTACA TGGACGAGCT GGAGCGGCGC
AGCCCCTTCA AATCGCCCTC CCTTCCACCC CCAACCGACC CGGCAAGCCC CTCATGA
 
Protein sequence
MKNNANDYVI RILDSPLKVD AAEWNALLAA QSLDGVLNPF MRHEYLAALE ASGSATPQTG 
WTPRFVTLWQ GATLAGACAL YLKAHSYGEY VFDWAWANAY QQHGLDYYPK ALVAVPFTPV
PGARLLARTA AERTLLVKAL VAWCEAEKLS SLHLLFASDD DVAACEQAGL MLRHTVQFHW
TAPPEGYRGF DAFLMSLSQE KRKKIRQERR KVADAGITFR WSLGQDISRA DWDFFYRCYE
RTYLEHGNAP YLSRDFFRRM EASMPENWLL FVAERDGVAV ASSLIAVSAR PDCANGKNDP
ENRPTHGLTA YGRYWGALAR VDCLHFEACY YQPLQWCIEH GFERFEGGAQ GEHKMARALL
PVRTTSAHWL AHPSFADAVE RFLEREGAGI DNYMDELERR SPFKSPSLPP PTDPASPS