Gene Pnap_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1694 
Symbol 
ID4688457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1792923 
End bp1795070 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content62% 
IMG OID639834698 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_981928 
Protein GI121604599 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.786135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAG TTTTGACAGC CAACAGCCCC ATCGGGGCCG CACCCCTCAA GAGCCGGCAG 
CCAGTCAAGC GCGCAGCGAG TTGGGGCGGC CTGGCTTCGC TGGGTAAATA CCGCGAAATC
ATCATTGCGG TCGCCCTGTT CCTGCTGTTC GACCTCGGGG TGCTGGTGCT GAACTTCTAC
ACCTCGTTCA AGATCGACCA GGACACCGTC GCCATCAACC TGTCAGGCCG CCAGCGTTAT
GTGTCACAAC GCGTCGCGCG CACCTTGCTG GAACTCGACG CCATGCGCAC CGCAGGCCTT
CCCTACAAGC CCGAGACGCT GGCCGAACTG CGCAACGGCA CCAAGATCTT CCAGATGTCG
CATGTGGCCT TCCGTGAAGG CGGAACGATT CCCGGCGGCG ACGGCAAACC GGTTTACCTG
GAGCCCGTCG TGTCCGAGCG CGGGCGCGAA CTTGAGGACA AGGTCGAAAC CCTGTGGCGG
CCTTATTACG AGTTGCTGCA GCCTTTGATG CGCAACGACG ACTTCGCGCC GGGGCAGCTG
GCCGCAGCGC TGACGTACAG CCAGGCCAAC AACATCAAGC TCCTGGGCGT CGCCAACGAC
TTTGTCACGG AAACCCAGCA GATCGGCGCG TCGCGGGCCA GCGTGCTGCG CATGGTGCAG
ACCGGCGGCA TCATCCTGGC GCTGCTGAAC TTTGCCTTTA TCCTGTTCAA GTTCCTGCGC
CGCCTGAATA CCTCGGATGC GGCCATCGAG GCCGCCAACG AAGAAAACCG GGAAATCCTC
ACCAGCGTGC GCGAAGGCCT GTTTCTGCTC ACGCCCGAAC ACCAGCTGGG CTCGCAACTG
TCCAGCTCGG CCCATGATTT GTTTGGCAAG ACCCTCGCTC CCGGCCAGGA TTTTTTCGAG
CTGCTGTCCA CCCTGGTTTC CGAGAAAGCG CTCAAGGACG CGCAGGACTA TGTCGAACTG
CTGTTCTCGC CGCATGTCAA GGAAAAGCTG ATCCAGGGCA TCAACCCGCT GGCTGAAGTA
GAACTGACCG TCAAAAACCG GCTGGGCCAG AACACGGCCC GCTACCTGTC CTTTTACTTC
AACCGGGTGC AGGACGGTGG CACCGTTCGC CATCTGCTGG TCACGGTGCA GGACATCACC
CAGAAAGTGG AGCTGCAAGC CAGGCTGACC GAGGAGCGCC AGCGCTCGCA AAAAGAGCTG
TCCATGATGC TCAAGGCATT CGAAACCGAC CCGGCCATGA TGCGCATGTT TGTCGAACGC
GCCGAAGTTT CGCTGCTCGA AGTCAATGAC CTGCTGCGCA GCACCTCGTC GGCTACGTCG
GAAACGCAGG TGCTCAAGGC GGTTGACGGC GCCTACCGCC GCATCCATGC CATCAAGGGC
GACGCCGCCT CCATGGGCCT GGAAATCCTG GCCTCGCTGG CCCACCAATT CGAAAGCGAA
CTGCAAAAAC TCAAGGACAG CGGCGCGGCC ACTGGCGACG CGCTGCTGGC CCTGCCCTTG
CCACTCGAAG ACCTGCTGTC TAAGGTCGCA GCCTTCAAGA AACTGAGCCA GAACAGGTCA
GCCAGCCCGG CCCTGCCGAC GCAAGAGTCC GTGCTTCAAG GACTCAACGC CAGCCTGGCC
AAATTGGCCG GCGATGTGGC GGTTGACTGC GGCAAGCGCG TCAATGCCAC CGTGCGCATG
GGCAGCGCGC TGGACATGCC GGCGGACAAA ATGGACCTGG TGCGCGAAGT GGCCGTCCAA
CTGGTTCGCA ATGCCGTGGT GCATGGCGTC GAGGCGCCTC TAACCCGGCT GGCCTGCAAC
AAGGCCGCCG AAGGACAGGT CGAGGTCAAC CTGGGCCGCG ATGAAGGCGG CCAATGGCTG
CTCAGCGTGC GCGATGACGG CGCGGGCCTC GATCCGGTCC ATGTGCGCCG CCGCCTGCTG
GAACTGAAGT GGTACACCGC CGAGCAACTG GAAAGCTTCA GCGACAAGCA AATCGCCTCG
CAAATCTTCA AGCCCGGCTT TTCCACTGCC GAGGCCACGA GCCAGCATGC CGGCCGGGGC
GTCGGCCTGG ACCTGGTGCA GTCCAATGTG CAGCGCCTGG GCGCGCGCTT GCTGCTGTCC
AGCAACCCGG GCCAGCACAC CGAGTTCAAG ATTTATTTTG CAGCCTGA
 
Protein sequence
MSSVLTANSP IGAAPLKSRQ PVKRAASWGG LASLGKYREI IIAVALFLLF DLGVLVLNFY 
TSFKIDQDTV AINLSGRQRY VSQRVARTLL ELDAMRTAGL PYKPETLAEL RNGTKIFQMS
HVAFREGGTI PGGDGKPVYL EPVVSERGRE LEDKVETLWR PYYELLQPLM RNDDFAPGQL
AAALTYSQAN NIKLLGVAND FVTETQQIGA SRASVLRMVQ TGGIILALLN FAFILFKFLR
RLNTSDAAIE AANEENREIL TSVREGLFLL TPEHQLGSQL SSSAHDLFGK TLAPGQDFFE
LLSTLVSEKA LKDAQDYVEL LFSPHVKEKL IQGINPLAEV ELTVKNRLGQ NTARYLSFYF
NRVQDGGTVR HLLVTVQDIT QKVELQARLT EERQRSQKEL SMMLKAFETD PAMMRMFVER
AEVSLLEVND LLRSTSSATS ETQVLKAVDG AYRRIHAIKG DAASMGLEIL ASLAHQFESE
LQKLKDSGAA TGDALLALPL PLEDLLSKVA AFKKLSQNRS ASPALPTQES VLQGLNASLA
KLAGDVAVDC GKRVNATVRM GSALDMPADK MDLVREVAVQ LVRNAVVHGV EAPLTRLACN
KAAEGQVEVN LGRDEGGQWL LSVRDDGAGL DPVHVRRRLL ELKWYTAEQL ESFSDKQIAS
QIFKPGFSTA EATSQHAGRG VGLDLVQSNV QRLGARLLLS SNPGQHTEFK IYFAA