Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1694 |
Symbol | |
ID | 4688457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1792923 |
End bp | 1795070 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639834698 |
Product | CheA signal transduction histidine kinases |
Protein accession | YP_981928 |
Protein GI | 121604599 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.786135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCAG TTTTGACAGC CAACAGCCCC ATCGGGGCCG CACCCCTCAA GAGCCGGCAG CCAGTCAAGC GCGCAGCGAG TTGGGGCGGC CTGGCTTCGC TGGGTAAATA CCGCGAAATC ATCATTGCGG TCGCCCTGTT CCTGCTGTTC GACCTCGGGG TGCTGGTGCT GAACTTCTAC ACCTCGTTCA AGATCGACCA GGACACCGTC GCCATCAACC TGTCAGGCCG CCAGCGTTAT GTGTCACAAC GCGTCGCGCG CACCTTGCTG GAACTCGACG CCATGCGCAC CGCAGGCCTT CCCTACAAGC CCGAGACGCT GGCCGAACTG CGCAACGGCA CCAAGATCTT CCAGATGTCG CATGTGGCCT TCCGTGAAGG CGGAACGATT CCCGGCGGCG ACGGCAAACC GGTTTACCTG GAGCCCGTCG TGTCCGAGCG CGGGCGCGAA CTTGAGGACA AGGTCGAAAC CCTGTGGCGG CCTTATTACG AGTTGCTGCA GCCTTTGATG CGCAACGACG ACTTCGCGCC GGGGCAGCTG GCCGCAGCGC TGACGTACAG CCAGGCCAAC AACATCAAGC TCCTGGGCGT CGCCAACGAC TTTGTCACGG AAACCCAGCA GATCGGCGCG TCGCGGGCCA GCGTGCTGCG CATGGTGCAG ACCGGCGGCA TCATCCTGGC GCTGCTGAAC TTTGCCTTTA TCCTGTTCAA GTTCCTGCGC CGCCTGAATA CCTCGGATGC GGCCATCGAG GCCGCCAACG AAGAAAACCG GGAAATCCTC ACCAGCGTGC GCGAAGGCCT GTTTCTGCTC ACGCCCGAAC ACCAGCTGGG CTCGCAACTG TCCAGCTCGG CCCATGATTT GTTTGGCAAG ACCCTCGCTC CCGGCCAGGA TTTTTTCGAG CTGCTGTCCA CCCTGGTTTC CGAGAAAGCG CTCAAGGACG CGCAGGACTA TGTCGAACTG CTGTTCTCGC CGCATGTCAA GGAAAAGCTG ATCCAGGGCA TCAACCCGCT GGCTGAAGTA GAACTGACCG TCAAAAACCG GCTGGGCCAG AACACGGCCC GCTACCTGTC CTTTTACTTC AACCGGGTGC AGGACGGTGG CACCGTTCGC CATCTGCTGG TCACGGTGCA GGACATCACC CAGAAAGTGG AGCTGCAAGC CAGGCTGACC GAGGAGCGCC AGCGCTCGCA AAAAGAGCTG TCCATGATGC TCAAGGCATT CGAAACCGAC CCGGCCATGA TGCGCATGTT TGTCGAACGC GCCGAAGTTT CGCTGCTCGA AGTCAATGAC CTGCTGCGCA GCACCTCGTC GGCTACGTCG GAAACGCAGG TGCTCAAGGC GGTTGACGGC GCCTACCGCC GCATCCATGC CATCAAGGGC GACGCCGCCT CCATGGGCCT GGAAATCCTG GCCTCGCTGG CCCACCAATT CGAAAGCGAA CTGCAAAAAC TCAAGGACAG CGGCGCGGCC ACTGGCGACG CGCTGCTGGC CCTGCCCTTG CCACTCGAAG ACCTGCTGTC TAAGGTCGCA GCCTTCAAGA AACTGAGCCA GAACAGGTCA GCCAGCCCGG CCCTGCCGAC GCAAGAGTCC GTGCTTCAAG GACTCAACGC CAGCCTGGCC AAATTGGCCG GCGATGTGGC GGTTGACTGC GGCAAGCGCG TCAATGCCAC CGTGCGCATG GGCAGCGCGC TGGACATGCC GGCGGACAAA ATGGACCTGG TGCGCGAAGT GGCCGTCCAA CTGGTTCGCA ATGCCGTGGT GCATGGCGTC GAGGCGCCTC TAACCCGGCT GGCCTGCAAC AAGGCCGCCG AAGGACAGGT CGAGGTCAAC CTGGGCCGCG ATGAAGGCGG CCAATGGCTG CTCAGCGTGC GCGATGACGG CGCGGGCCTC GATCCGGTCC ATGTGCGCCG CCGCCTGCTG GAACTGAAGT GGTACACCGC CGAGCAACTG GAAAGCTTCA GCGACAAGCA AATCGCCTCG CAAATCTTCA AGCCCGGCTT TTCCACTGCC GAGGCCACGA GCCAGCATGC CGGCCGGGGC GTCGGCCTGG ACCTGGTGCA GTCCAATGTG CAGCGCCTGG GCGCGCGCTT GCTGCTGTCC AGCAACCCGG GCCAGCACAC CGAGTTCAAG ATTTATTTTG CAGCCTGA
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Protein sequence | MSSVLTANSP IGAAPLKSRQ PVKRAASWGG LASLGKYREI IIAVALFLLF DLGVLVLNFY TSFKIDQDTV AINLSGRQRY VSQRVARTLL ELDAMRTAGL PYKPETLAEL RNGTKIFQMS HVAFREGGTI PGGDGKPVYL EPVVSERGRE LEDKVETLWR PYYELLQPLM RNDDFAPGQL AAALTYSQAN NIKLLGVAND FVTETQQIGA SRASVLRMVQ TGGIILALLN FAFILFKFLR RLNTSDAAIE AANEENREIL TSVREGLFLL TPEHQLGSQL SSSAHDLFGK TLAPGQDFFE LLSTLVSEKA LKDAQDYVEL LFSPHVKEKL IQGINPLAEV ELTVKNRLGQ NTARYLSFYF NRVQDGGTVR HLLVTVQDIT QKVELQARLT EERQRSQKEL SMMLKAFETD PAMMRMFVER AEVSLLEVND LLRSTSSATS ETQVLKAVDG AYRRIHAIKG DAASMGLEIL ASLAHQFESE LQKLKDSGAA TGDALLALPL PLEDLLSKVA AFKKLSQNRS ASPALPTQES VLQGLNASLA KLAGDVAVDC GKRVNATVRM GSALDMPADK MDLVREVAVQ LVRNAVVHGV EAPLTRLACN KAAEGQVEVN LGRDEGGQWL LSVRDDGAGL DPVHVRRRLL ELKWYTAEQL ESFSDKQIAS QIFKPGFSTA EATSQHAGRG VGLDLVQSNV QRLGARLLLS SNPGQHTEFK IYFAA
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