Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1601 |
Symbol | |
ID | 4686220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1685504 |
End bp | 1686472 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639834604 |
Product | hypothetical protein |
Protein accession | YP_981836 |
Protein GI | 121604507 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0236612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATCA ATCGACGTGA TCTTATCGGC GCTTCATTGG CCCTCGGCAT CGGCGCGGCC GGCGCGCAGC CGCAAAACTG GCCCTCCAAG CCGATCCGGC TGGTGGTGCC TTACCCGCCG GGCGGCTCCT CGGACATCAT TGCGCGCTCC ATTGCCCAGC CCCTGTCGGA GGCGCTCAAG CAGTCGGTCA TCGTTGAAAA CAAGGCCGGC GCCAACGGCA ACCTGGGCGC CGATTACGTC GCCAAGTCGG CCCCCGACGG CTACACGCTG CTGCTGTGCG ACACCGGCGC GCTGGCCATC AGCCCGTCGG TGTATACCAA GCTGCCGTTC GATCCAGCCA AGGACCTGCG CGGCGTGACC ATGCTGGCCT ATTCGCCGCA TCTGCTGGTC GTGCATCCTT CGGTGCCGGC CAGCAACCTC AAGGAACTGG TGGCGCTGTC GAAAAAAACC GAGCTGAACT TTGCCGTCAC GGCCATGGGC AGCGCGCCGC ACCTGGCCGG CGTGGCGGTC GAGCGCGCCA GCGGTGCCAA ATGGCAGTAC ATCCCGTACA AGGGCGGCTC GCAGGCAATT ACCGACACCA TTGCCGGCCA GACGCAGGTC TTGATGAACG GCATGCTCGC CACGCTGCCT TTTGTGCAGA GCGGCAAGCT CAAGATATTG GGCGTCTCCA AAGGCAGCCG CATGCCGCTG ATCGGCAACG TGCCCACGCT GGCCGAGCAA GGCCTGAGCG GCTTCGAATC AGGCACCTGG CAGGGCTTGC TGGTGGCCAA CGGCACGCCG GCCGCCATCA TCAACCGGCT CAATGCCGAA CTGATCAAGA TCATCCGCAA CCCCGACATC CGCGCCAAGC TGGCCGGGCA GGGCGCCGAG GTGGTGACCA TGACGTCGGT GCAGCAGGAC GAGTTCTTCA ACCGCGAAAA AACCCGCTGG GCCAAAGTCG TTTCCGAGGC GAACATCAAG CTGGATTGA
|
Protein sequence | MSINRRDLIG ASLALGIGAA GAQPQNWPSK PIRLVVPYPP GGSSDIIARS IAQPLSEALK QSVIVENKAG ANGNLGADYV AKSAPDGYTL LLCDTGALAI SPSVYTKLPF DPAKDLRGVT MLAYSPHLLV VHPSVPASNL KELVALSKKT ELNFAVTAMG SAPHLAGVAV ERASGAKWQY IPYKGGSQAI TDTIAGQTQV LMNGMLATLP FVQSGKLKIL GVSKGSRMPL IGNVPTLAEQ GLSGFESGTW QGLLVANGTP AAIINRLNAE LIKIIRNPDI RAKLAGQGAE VVTMTSVQQD EFFNREKTRW AKVVSEANIK LD
|
| |