| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1595 |
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| Symbol | |
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| ID | 4686548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1678317 |
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| End bp | 1679609 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834598 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_981830 |
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| Protein GI | 121604501 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA CCGTACTCGC CCTGAGCTTC ACGCTCCTGC TGATCATCGG CGTGCCGGTT
GCCTTTTCGA TTGGACTGGC GTCGGTGGCC ACCATCCTTG CCGCCGGCCT GCCGGTCGCG
GTGGTGTTCC AGAAGATGGT CGGCGGCATG CAGATCTTCT CCTTCCTCGC CATTCCCTTC
TTTGTCTTCG CCGGCGAGTT GATGCTCTAC GGCGGCATTG CCGAGCGCAT CGTGCGCTTT
GCCAACAGCC TGGTCGGCCA TGTGCGCGGC GGCCTGGGCA TGAGCAACGT GATCGGCTGC
ACGCTGTTCG GCGGCGTGGC CGGCTCGCCG CTGGCGGACG TGTCGGCCAT CGGCTCGGTG
ATGATTCCGC TGATGAAGAA GGAAGGCTAC GACGCCGATT ACGCGGTCAA CGTCACGACG
CACGCCGCGC TGGTCGGCGC CATCATGCCG ACCTCGCACA ACATGATCAT CTTCACGCTG
GCCACCTCGG GCATTGCCTC GGTCAGCGTG CTGAGCCTGA TCCTGGCGGG CCTGGTGCCG
GCGATTCTGC TGACGCTGTG CAACCTGGGC GCGGCCTACT ACGTGGCCGT CAAGCGCGGC
TACCCGACAC GCGGTGCCTT CCCCGGCTGG GGCGAGGTCA TGCGCGCCTT CGGTGCTTCG
TTGCCGGGCC TGCTGGTGGT GGTGATCATT CTGGTCGGCA TCCTGTCCGG CGCGTTCACC
GCGACCGAGT CGGCATCGAT TGCCGTGGCC TGGGCGCTGT TCATCACGGC AGTGGTTTAC
CGCACGATGT CCTGGAAAAA CTTCATGACG GCCTGCGCCA AGGCCTGCAA GACCACCGGC
GTGGTGCTGC TGCTGATCGG CATCTCGAAC GCGTTCGGCT ACTTCATGGC GCTGTACGAG
GTGCCGCAGC TGACCGGCGA GCTGATGAAG TCGATCAGCA GCGAGCCCTG GGTCATCTTT
TTCATGATCA ACGTGCTGCT GTTCATCCTC GGCACCTTCC TCGACATGGC CGCGACCATC
CTGATCTGCA CGCCGATCTT CATGCCGATT GCCATGCAGT TCGGCATGGA CCCGGTGCAG
TTCGGCATCG TGATGCTGAT CAACTGTGCG CTGGGCCTGA ACACGCCGCC GGTCGGCTCG
GTGCAGTTCG TCGGCTGCGC GATAGGCGGG ATATCGGTCG GGCAGGTGAT GCGTTCGATC
CTGCCGTTCT ACAGCGCGCT GGGCATCTGC CTGTTGCTGG TGACCTATGT GCCTGCATTC
TCGATGTGGC TGCCCAACTT GATCACCAAG TAA
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| Protein sequence | MELTVLALSF TLLLIIGVPV AFSIGLASVA TILAAGLPVA VVFQKMVGGM QIFSFLAIPF
FVFAGELMLY GGIAERIVRF ANSLVGHVRG GLGMSNVIGC TLFGGVAGSP LADVSAIGSV
MIPLMKKEGY DADYAVNVTT HAALVGAIMP TSHNMIIFTL ATSGIASVSV LSLILAGLVP
AILLTLCNLG AAYYVAVKRG YPTRGAFPGW GEVMRAFGAS LPGLLVVVII LVGILSGAFT
ATESASIAVA WALFITAVVY RTMSWKNFMT ACAKACKTTG VVLLLIGISN AFGYFMALYE
VPQLTGELMK SISSEPWVIF FMINVLLFIL GTFLDMAATI LICTPIFMPI AMQFGMDPVQ
FGIVMLINCA LGLNTPPVGS VQFVGCAIGG ISVGQVMRSI LPFYSALGIC LLLVTYVPAF
SMWLPNLITK
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