| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1593 |
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| Symbol | |
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| ID | 4686449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1676757 |
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| End bp | 1677728 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834596 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_981828 |
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| Protein GI | 121604499 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC AAAAAACACT GCTGGCCGTT GCAGCCGCGC TGACCCTGGT TCCCGTGGCG
AGTTCCGCCG CCACGTTCCG CTCCGCCGAT ATCCACAACG CCGACGACTA CCCGACCGTG
GTCGCCGTGA AATACATGAG CGACGTGCTG GAGAAAAAGA GCGGTGGCAA GTACAAGATC
AAGGTGTTCA ACAAGGGCGC GCTGGGCACT GAAAAGGAAA CCATTGACCA GGTCAAGATT
GGCGCGCTTG ATTTGACCCG CGTCAACATC AGCCCGATGA ATGCGATCTG CCAGAAGACG
CAGGTTCCGA CCATGCCTTT CCTGTTCCAT TCGGTCGAGC ACATGCGCAA GTCGCTTGAC
GGCCCGGCCG GCGAGGAAAT TTTGAAAGAC TGCGAAGCCC AGGGCTTCAT CGGCCTGGCT
TTTTATGACA GCGGCGCGCG CTCGATCTAT GCCAAGAAGC CGATCAAGAC CGTGGCCGAC
GTGAAGGGCC TGAAGATTCG CGTCCAGCAG TCCGACCTGT GGGTTTCGCT GATTGGCGCC
ATGGGCGGCA ACGCCACGCC GATGCCTTAC GGCGAGGTCT ATACCGGCCT GAAGACCGGC
CTGATCGACG CGGCCGAGAA CAACATCCCG TCGTTTGACA CCTCCAAGCA CTATGAAGCG
GTGAAGTTCT ATTCCAAGAC CGAGCACTCG ATGGCGCCCG AAATGCTGCT GATGTCCAAG
GTGATCTGGG ACAAGCTGCC CAAGGCGGAC CAGGACATGA TCCGCAGCGC GGCCAAGGAA
TCGGTCGCCG TGCAGCGCAA GAAGTGGGAT GAGCAGGAAG CCAAGTCGCT GGCCGTTGTC
AAGGCCGGCG GCGCCCAGAT CGTCGAGGTG GACAAGGCCT CGTTCCAGGC CGTGATGGGT
CCGGTTTATG ACAAGTTCAT TGTCACGCCT GACATGAAGC GCCTGGTCAA GTCCATTCAG
GACACCAAGT AA
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| Protein sequence | MKIQKTLLAV AAALTLVPVA SSAATFRSAD IHNADDYPTV VAVKYMSDVL EKKSGGKYKI
KVFNKGALGT EKETIDQVKI GALDLTRVNI SPMNAICQKT QVPTMPFLFH SVEHMRKSLD
GPAGEEILKD CEAQGFIGLA FYDSGARSIY AKKPIKTVAD VKGLKIRVQQ SDLWVSLIGA
MGGNATPMPY GEVYTGLKTG LIDAAENNIP SFDTSKHYEA VKFYSKTEHS MAPEMLLMSK
VIWDKLPKAD QDMIRSAAKE SVAVQRKKWD EQEAKSLAVV KAGGAQIVEV DKASFQAVMG
PVYDKFIVTP DMKRLVKSIQ DTK
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