| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1582 |
|---|
| Symbol | |
|---|
| ID | 4687003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1666367 |
|---|
| End bp | 1667515 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639834585 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_981817 |
|---|
| Protein GI | 121604488 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.533232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTACC TCGACCACAA CGCCACCACG CCGCCCGCGC CTGCGGTCGT CGCGGCCATG
CTGCCGGTGC TGTCCAGCCT GTGGGCCAAC AGCTCTTCGC AACACGGGCC GGGGCAGGAA
GCCAGGCGCG CCCTGGGCGC CGCACGGAGC GCGGTGGCGC GGGTGCTGGG CTGCAAGCCC
GTCGAGGTCG TTTTTACCAG CGGCGCCACC GAGGCCAACC ACATGGCCGT GCGCGGCCTG
CTGGCCGCCG CCGCCCCTGA GCGGCGGCGT GTCGTGTTCA GCCGCATCGA GCATGCGGGC
CACCTGCGCC TGGCGCGCGC GCTGGCCGAG AGCGGCGTTC AGGTGGACTT CATTCCGGTG
CTGGCCGATG GCACGCTGGA TCTGCCCGCC GCCGCCGCGC TGATCGGCCC CGACGTGGCG
CTGGTCTCGC TGATGGCCGC CAACAATGAA ACCGGCGCCC TGATGCCGGT GGCCGAAGCC
GCCGCGCTGG CGCAGGCCGC CGGGGCGCGG CTGCATGTGG ACGCCACCCA GTTCATCGGC
AAGCAGCCGT TTGTTTTTTC CACCTGCGGC GCGGATGCCG TGTCGCTGTC AGCGCACAAG
TTCAATGGCC CCAAGGGCGT GGGCGCGCTG CTGCTGCGCC AGGGGACGCC TTTCACCGCG
CAAACGCTGG GCAGCCAGGA GCGCGGCCGC CGTGGCGGCA CCGAGAACCT GGCCGGCATT
GTCGGGCTGG CGGCGGCGCT GGAGCTGCTG GGCGATGTGA GCGTGGAAGC CGCCCGCCTG
GCCGCTTTGC GCGATGCGCT TGAAAACGGA TTGATTCACG CGCTGCCAGC CACCCACATC
TGGTGCCGCA GCGTGCCGCG CCTGCCCGGC ACCAGCTACC TGCGCTTTGG CCAGCTGTCG
GTCGATGTGG TGCTGCAGCG GCTGGAGCGC CTGGGCGTGG CCGCGTCGTC GGGCGCGGCC
TGCTCCTCCG GCGGCAGCGA GCCTTCGCAT GTTTTGACGG CGATGGGCGT TCCGGCCGAC
GAGGCGCTGG CCGCCGTGCG GCTGTCGCTG GGCCGCACCA CCACGGCCGA AGACGTGGCT
TCCTTGCTTG CCTTGCTGCC GCCGCTCCTG GAGCCGCTGC TGCAGGAAGA AATGTTGATT
GCTCCTTAA
|
|---|
| Protein sequence | MIYLDHNATT PPAPAVVAAM LPVLSSLWAN SSSQHGPGQE ARRALGAARS AVARVLGCKP
VEVVFTSGAT EANHMAVRGL LAAAAPERRR VVFSRIEHAG HLRLARALAE SGVQVDFIPV
LADGTLDLPA AAALIGPDVA LVSLMAANNE TGALMPVAEA AALAQAAGAR LHVDATQFIG
KQPFVFSTCG ADAVSLSAHK FNGPKGVGAL LLRQGTPFTA QTLGSQERGR RGGTENLAGI
VGLAAALELL GDVSVEAARL AALRDALENG LIHALPATHI WCRSVPRLPG TSYLRFGQLS
VDVVLQRLER LGVAASSGAA CSSGGSEPSH VLTAMGVPAD EALAAVRLSL GRTTTAEDVA
SLLALLPPLL EPLLQEEMLI AP
|
|---|
| |