| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1537 |
|---|
| Symbol | |
|---|
| ID | 4690026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1626287 |
|---|
| End bp | 1626994 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639834540 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981772 |
|---|
| Protein GI | 121604443 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1814] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCAAGA AACCGCTCAG CCGCCACCTC GAACGCCATC GCACGGACCG CATCGGCTGG
CTGCGCGCCG CCGTGCTGGG CGCCAACGAC GGCATTGTCT CCACCGCCAG CCTGGTGCTG
GGCGTGGCTG CCGCCGGCGC CGATCAGCAA GCTATTTTGG TCGCCGGCGT GGCCGGGTTG
ATGGCCGGCG CCATGTCGAT GGCGGCAGGT GAATATGTCT CGGTCCACTC CCAGGCCGAT
ACGGAAAACG CCGAGCTGGA GCGCGAGCGC CTTGAAATCG AACAGCATCC TCTTGCCGAG
CATGCAGAAC TGGCGGGCAT CTATGCGGCA CGCGGCCTGA GCCCTGAGCT GGCCCGCCAG
GTGGCCGAGC AATTGATGGT GCATGACGCA CTGGGCGCCC ATGTGCGCGA TGAACTGGGC
ATTTCCGACA CCTTGAGCGC GCATCCGGTC CAGGCCGCCC TGGCGTCGGC GAGCAGCTTT
GCGCTGGGCG CGGCGTTGCC GCTGGCCGTC ATCGCCCTGG CGCCAGCGCG GGGGCTGACC
GCCTGGGTGG CGCTGACTTC GCTGGTTTTC CTGGCGCTGC TGGGCGCCCT GGCTGCCCGT
GCCGGTGGCG CCAGCCTTGT CGCCGGCGCC TGGCGCGTCA CTTTCTGGGG CGCGCTGGCG
ATGGCGATCA CGGCAGGGGT TGGCGCACTG TTCGGCGCTG TTGTGTAA
|
|---|
| Protein sequence | MPKKPLSRHL ERHRTDRIGW LRAAVLGAND GIVSTASLVL GVAAAGADQQ AILVAGVAGL
MAGAMSMAAG EYVSVHSQAD TENAELERER LEIEQHPLAE HAELAGIYAA RGLSPELARQ
VAEQLMVHDA LGAHVRDELG ISDTLSAHPV QAALASASSF ALGAALPLAV IALAPARGLT
AWVALTSLVF LALLGALAAR AGGASLVAGA WRVTFWGALA MAITAGVGAL FGAVV
|
|---|
| |