Gene Pnap_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1528 
Symbol 
ID4688818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1619207 
End bp1619530 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content61% 
IMG OID639834531 
Productputative transcriptional regulator 
Protein accessionYP_981763 
Protein GI121604434 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCA AAGAAAACGC CGCCGTAAGC CTGCTGCTTG AACTGCTGGA ATCGCGCTAC 
GCACTGCGTG TGCTGTGGGC ACTGAAAGAC GGCCATCCCC AGACCTTCCG GCTGCTCCAG
GACAGCATCG GCAACATCAC GCCCAACACC CTGAACACCC GCATCAAGGA ATTGCGCGCC
GCCGGCCTGC TCGGCCATGG CGAAAAAGGC TACACCGTCA CCACGCTGGG CGCGGACCTG
CTCAAACGCC TGAACGACCT GCAGGCGTTT GCCGGCAAAT GGGCCGTCAG CCAGACCAAG
GTCAGCGCCG ACACCAATAA ATAA
 
Protein sequence
MSAKENAAVS LLLELLESRY ALRVLWALKD GHPQTFRLLQ DSIGNITPNT LNTRIKELRA 
AGLLGHGEKG YTVTTLGADL LKRLNDLQAF AGKWAVSQTK VSADTNK