| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1487 |
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| Symbol | |
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| ID | 4687554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1575446 |
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| End bp | 1576261 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834490 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_981722 |
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| Protein GI | 121604393 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTG AAGTTTCCGG CGCCGCCGCC GCGCCGCCCA TCCTGATTTC GCTGACGGCC
TTTGGCGCCG CCGAAGTGCG CCGCCATGGC CAGCGCTGGT TTGCACGGCT CTGCCATGAA
GCTGGCGCCG ACGGCGTCGA GGTGCGCAGC GAACTGCTGG TGGACGCCGC CCGCGAGTTG
CCGGCCATCG CCGAGACGGT TCGCGACACC GGCCTGCGGG TGGTGTATTC GAGCGCCGAC
TACCTCTGGG CGGCTGACGG CGCACTGGAC ATGGCCGCAC TCCAGCGCGC CCTGAATGCC
GCCAAAATCC TGGGCGCACC CCGGCTGAAA ATGGCGATTG GCGGTTTTGG CGCCTCGTCC
CACGCAAGCC TGATGGCACT GCGGGACTGC CTGCAGGCCG CCAAAATCGA ACTCGTGATC
GAAAACGACC AGACGCCGGC GGCCGGCACC CTGCCCGCGC TGCAGGACTT TTTTGACACG
GCCAATGACC TCGGTATTTT CCTCGGCATG ACGTTTGACA TGGGCAACTG GCACTGGAGT
GGCGAATGCC CGCTGCAGGC CGCAGGCGCG CTGGCGCCGC AGGTGCGCTA TGTGCATTGC
AAGGGCGTGC AGCGCCAGCC GCAGCGCTGG GTGGCCGTGC CGCTGGCCGA ATCCAGCGCA
CCGTGGCGCG CCGTGCTGCG CGCCCTGCCG GCCGATGTGC CCTGGGCGAT TGAATACCCG
CTGATCGGCG ACGACCTGCC CGCCGTGACG CGCCGTGAAA TCGACCAGTT GCGCAGCATT
GCCGCCAGCA TGGCTGGCAG AAAGAAATTG ACATGA
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| Protein sequence | MPTEVSGAAA APPILISLTA FGAAEVRRHG QRWFARLCHE AGADGVEVRS ELLVDAAREL
PAIAETVRDT GLRVVYSSAD YLWAADGALD MAALQRALNA AKILGAPRLK MAIGGFGASS
HASLMALRDC LQAAKIELVI ENDQTPAAGT LPALQDFFDT ANDLGIFLGM TFDMGNWHWS
GECPLQAAGA LAPQVRYVHC KGVQRQPQRW VAVPLAESSA PWRAVLRALP ADVPWAIEYP
LIGDDLPAVT RREIDQLRSI AASMAGRKKL T
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