| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1403 |
|---|
| Symbol | |
|---|
| ID | 4687169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1487688 |
|---|
| End bp | 1488593 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639834405 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_981638 |
|---|
| Protein GI | 121604309 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.508618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA GCCACTACAT CAAAGAAATC GGGCGCGGCA AGGACGGCGC CCGTCCCCTG
TCACGCGCGC AGGCCGCCGA CCTGCTGGGC CAGGTGCTCG ACGGCGTGGT CACCGACCTG
GAAATCGGCG GCTTTTGCCT GGCCATGCGC ATCAAGGGCG AAACCCCCGA GGAAATGGCT
GGCTTTCTCG ACGCCGTGCA CCAGCGCCTC AACCTGCTGC CCGCCAGCGA CGGCCCCACC
GTGGTGCTGC CCAGCTACAA CGGTGCGCGC AAGCTGCCGG TGCTCACGCC GCTGCTGGCG
CTGCTGCTGG CCCGTGAGGG CCTGAGCGTG CTGGTGCATG GAACGCCCAC CGAATCGAGC
CGTGTTTTTT CATCGGAAGT GCTGTCTGCG CTAGGTACGC AAGCGCTGAC AGCTATCAAA
CCCATAGCAC CCGGCGAAGT GGTGTTCGCG CCCACCGAAC TGCTCAGTCC GGCGCTCAAG
CGCCTGCTCG ACGTGCGCCG CGCGGTCGGC CTGCGCAATC CGGCGCACAG CCTGGTCAAG
CTGATGAATC CGGTGGCCGG CAAGGCGCTG GTCGTCAGCA GCTACACGCA TCCAGAATAC
GCGCTGTCCA TGGCGGCCAC CTTCGAGCTC GTCCAGGCCG ATGCGCTGCT GCTGCGCGGC
ACCGAAGGCG AAGGCGTGGC CGACCCGCGC CGCTCGCCGC AGATGCAGGG CTTTGTCAAG
GGACAGCGCG TGCTGGCCCA CGAAGGCGTG AAGGGAACCC TGCCCTCCGT GCCTGATCTA
CCCAAGGCCA TCGACGCCAG CAGCACGGCG GCCTATATCC AGTCGGTGCT GGCGGGCGAC
AGCCCCCTGC CGCCGTCGAT TGCGCAGCAG GTGGAACATA TCTTGCAACT TGTCAGGCAA
TTATGA
|
|---|
| Protein sequence | MSISHYIKEI GRGKDGARPL SRAQAADLLG QVLDGVVTDL EIGGFCLAMR IKGETPEEMA
GFLDAVHQRL NLLPASDGPT VVLPSYNGAR KLPVLTPLLA LLLAREGLSV LVHGTPTESS
RVFSSEVLSA LGTQALTAIK PIAPGEVVFA PTELLSPALK RLLDVRRAVG LRNPAHSLVK
LMNPVAGKAL VVSSYTHPEY ALSMAATFEL VQADALLLRG TEGEGVADPR RSPQMQGFVK
GQRVLAHEGV KGTLPSVPDL PKAIDASSTA AYIQSVLAGD SPLPPSIAQQ VEHILQLVRQ
L
|
|---|
| |