Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1360 |
Symbol | |
ID | 4687293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1448698 |
End bp | 1449588 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639834363 |
Product | hypothetical protein |
Protein accession | YP_981596 |
Protein GI | 121604267 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.170247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00808749 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACGACCC TCACCCTGCC GCAGCCCGGA AGCCTGCTTC GCCTATCCGA CCTGACGCTG CTCGGGGTGG CCGTGGTCTG GGGCACCAGC TATGGCGTGG CCAAGGGCGC GCTGGCCTTT TACCCGGTGC TGGGCTTTCT GGCCGTGCGC TTCATCCTGA CGTTTGTCCT GCTGCTGCCG GCGCTGCTGC GCGCCAAGGG CCGGCAAAGG ATGGATGCGG TGCGTGCCGG CCTGCCGCTG GGCGCCTTGA TGCTGGGCAT TTTCCTGTGC GAAACCTTTG GCGTCGCGCA CACGCAGGCC AGCAACGCCG CGTTTTTGAT CAGCCTGTGC GTGGTGTTCA CGCCTTTTGT CGAATGGTGG CTGCTGGGCC ACCGGCCGGC CAGGGCGATG TTTGTGTTTG CCGGCATCTC GCTGCTGGGC GCGGCCCTGC TCAGCGGCGG GCTGGCCGGG CAGTTCGGCC TGGGCGATGG CTTGATGCTG ACGGCCGCCG TGCTGCGCGC CATCACGGTG TGCCAGACCA GCAAGCTGAC CCGGCGCAGC AGCGCCCCAG CCCTGGCATT GACGGCGGTA CAGGCCGGCG TGATCGGTTT TGGCAGCCTG CTGCTGGCCT TGTTGATGCC CGGCGAACTG CCGCCGCTGC CGCTTGACAG CGCCTTCTGG CTGACCAGCG CCTACCTGGT GCTGGGCTGC ACCGTGTTTG CTTTCTTCGC GCAGAACTGG GCGCTTCAGC GCACATCGCC CAGCCGCGTC GCCTTGCTGA CGAGCAGCGA GCCGGCCTTC GGCGCGCTGT TCGCGGTGCT CTGGCTGGGC GAAGGGCTGA GCATCACGGG CTGGCTGGGC GGCGGGCTCA TCGTCATGGC GGCGCTGTGG ACGACCGCCC GGCGCGGCTG A
|
Protein sequence | MTTLTLPQPG SLLRLSDLTL LGVAVVWGTS YGVAKGALAF YPVLGFLAVR FILTFVLLLP ALLRAKGRQR MDAVRAGLPL GALMLGIFLC ETFGVAHTQA SNAAFLISLC VVFTPFVEWW LLGHRPARAM FVFAGISLLG AALLSGGLAG QFGLGDGLML TAAVLRAITV CQTSKLTRRS SAPALALTAV QAGVIGFGSL LLALLMPGEL PPLPLDSAFW LTSAYLVLGC TVFAFFAQNW ALQRTSPSRV ALLTSSEPAF GALFAVLWLG EGLSITGWLG GGLIVMAALW TTARRG
|
| |