Gene Pnap_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1360 
Symbol 
ID4687293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1448698 
End bp1449588 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID639834363 
Producthypothetical protein 
Protein accessionYP_981596 
Protein GI121604267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.170247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00808749 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACCC TCACCCTGCC GCAGCCCGGA AGCCTGCTTC GCCTATCCGA CCTGACGCTG 
CTCGGGGTGG CCGTGGTCTG GGGCACCAGC TATGGCGTGG CCAAGGGCGC GCTGGCCTTT
TACCCGGTGC TGGGCTTTCT GGCCGTGCGC TTCATCCTGA CGTTTGTCCT GCTGCTGCCG
GCGCTGCTGC GCGCCAAGGG CCGGCAAAGG ATGGATGCGG TGCGTGCCGG CCTGCCGCTG
GGCGCCTTGA TGCTGGGCAT TTTCCTGTGC GAAACCTTTG GCGTCGCGCA CACGCAGGCC
AGCAACGCCG CGTTTTTGAT CAGCCTGTGC GTGGTGTTCA CGCCTTTTGT CGAATGGTGG
CTGCTGGGCC ACCGGCCGGC CAGGGCGATG TTTGTGTTTG CCGGCATCTC GCTGCTGGGC
GCGGCCCTGC TCAGCGGCGG GCTGGCCGGG CAGTTCGGCC TGGGCGATGG CTTGATGCTG
ACGGCCGCCG TGCTGCGCGC CATCACGGTG TGCCAGACCA GCAAGCTGAC CCGGCGCAGC
AGCGCCCCAG CCCTGGCATT GACGGCGGTA CAGGCCGGCG TGATCGGTTT TGGCAGCCTG
CTGCTGGCCT TGTTGATGCC CGGCGAACTG CCGCCGCTGC CGCTTGACAG CGCCTTCTGG
CTGACCAGCG CCTACCTGGT GCTGGGCTGC ACCGTGTTTG CTTTCTTCGC GCAGAACTGG
GCGCTTCAGC GCACATCGCC CAGCCGCGTC GCCTTGCTGA CGAGCAGCGA GCCGGCCTTC
GGCGCGCTGT TCGCGGTGCT CTGGCTGGGC GAAGGGCTGA GCATCACGGG CTGGCTGGGC
GGCGGGCTCA TCGTCATGGC GGCGCTGTGG ACGACCGCCC GGCGCGGCTG A
 
Protein sequence
MTTLTLPQPG SLLRLSDLTL LGVAVVWGTS YGVAKGALAF YPVLGFLAVR FILTFVLLLP 
ALLRAKGRQR MDAVRAGLPL GALMLGIFLC ETFGVAHTQA SNAAFLISLC VVFTPFVEWW
LLGHRPARAM FVFAGISLLG AALLSGGLAG QFGLGDGLML TAAVLRAITV CQTSKLTRRS
SAPALALTAV QAGVIGFGSL LLALLMPGEL PPLPLDSAFW LTSAYLVLGC TVFAFFAQNW
ALQRTSPSRV ALLTSSEPAF GALFAVLWLG EGLSITGWLG GGLIVMAALW TTARRG