Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1267 |
Symbol | |
ID | 4687929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1359554 |
End bp | 1360471 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834270 |
Product | Ion transport protein |
Protein accession | YP_981503 |
Protein GI | 121604174 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.905498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCCAC CTGACAGCAA CCCCCCGAGT TCCGTGCCTG AAAAGCCCCT GGAAGGCTGG CGCCTGCGCT GGTACACGGT GATTTTCGAG GCCGACACCC GCGCCGGCCG GCTGTTTGAC CAGGCCTTGA TCGGCGTCAT CTTGCTCAGC ATCGCGGTGG TCATGGCCGA CAGCGTGGAG TCTGTCCATC GCCTGCACGG CCGGGCATTT GCGGTGTTCG AGTGGATATT CACGCTGCTT TTCACCTTCG AATACATCGC CCGGCTGCTG AGCGTGCGCA AGCCCTGGCG TTACGCCACC AGCTTTTTCG GCATCATTGA CCTGATTGCC TTGCTGCCGA CCTACCTGGC GCTGTTTGTT CCCGAACTCC ACGCCCTGAT TGATGTGCGC GTGCTGCGGC TGCTGCGCGT GTTCCGGATA TTCAAGCTGA CCGCCTATGT GGCCGAATAC CAGTCGCTGG GTCAGGCGCT GGCGGCCAGC CGCCGCAAGA TCATGGTCTT TTTGTCGGCG GTGCTGATGA TGGTGCTGGT CATGGGGACG GTGATGTACG TGGTCGAAGG CCGCGGCAAC GGCTTTACCA GCATTCCCAC CTCGGTTTAC TGGGCCATCA GCACGGTGAC GACGGTTGGC TTTGGCGACA TCACGCCCAA GACCGATTTG GGGCGGCTGG TTTCTTCCTT CATGATGCTG CTGGGCTGGG GCATCCTGGC CGTTCCCACC GGCATCGTGT CGGCGGAAAT GGCCGCGCAG CGGCGCATGC AGCTGACGCA AGCGACCACC ACGCGCACCT GCCACGAGTG CCTGACCGAA GGCCATGCGC CTGACGCCAC TTATTGCCTT CACTGCGGCG CCAGGCTGCC GGTCTACCAG CAGCATGAAC TGGCGCCAGA CGCGCCTGCG CCCGGGCGAG CGTCCTGA
|
Protein sequence | MAPPDSNPPS SVPEKPLEGW RLRWYTVIFE ADTRAGRLFD QALIGVILLS IAVVMADSVE SVHRLHGRAF AVFEWIFTLL FTFEYIARLL SVRKPWRYAT SFFGIIDLIA LLPTYLALFV PELHALIDVR VLRLLRVFRI FKLTAYVAEY QSLGQALAAS RRKIMVFLSA VLMMVLVMGT VMYVVEGRGN GFTSIPTSVY WAISTVTTVG FGDITPKTDL GRLVSSFMML LGWGILAVPT GIVSAEMAAQ RRMQLTQATT TRTCHECLTE GHAPDATYCL HCGARLPVYQ QHELAPDAPA PGRAS
|
| |