| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1248 |
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| Symbol | |
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| ID | 4687975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1341556 |
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| End bp | 1342833 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834251 |
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| Product | amidohydrolase |
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| Protein accession | YP_981484 |
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| Protein GI | 121604155 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.144528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTC AAGCATCTAC CCTTCTTCGT GCAAGCCTGG CTTCAAACTC ATTTTTAAAG
GTGCTCAACG TGAAAATTAT TGACTCCCTC GCCTCCGGGG CCGCAGAAAT CGCAGCCGTT
CGCCGTGACA TTCATGCCCA CCCGGAACTG TGCTTTGAGG AACTGCGCAC GGCCGACGTG
GTGGCCCGTC AATTGACCGG CTGGGGCATT CCGGTTCACC GGGGCATGGG CACCACCGGC
GTGGTCGGCA TCGTGCATGG CCGCGACGGC GGCGCCTGCG GGCGCGGCGT CGGCCTGCGC
GCCGACATGG ACGCCCTGCC CATGCAGGAA TTCAACACCT TCGCCCATGC CAGCCAGCAT
GCGGGCAAGA TGCACGCCTG CGGTCATGAC GGCCACACCG CCATGCTGCT GGCCGCCGCG
CAGCATTTGT CAACGCACCG CGACTTCGAC GGCACGGTGT ACCTGATCTT CCAGCCAGCC
GAGGAAGGCG GCGGCGGCGC CCGGGAGATG ATCCGGGACG GCCTGTTTGA AAAGTTTCCC
ATGGAAGCTG TTTTTGGCAT GCACAACTGG CCGGGCGGCG CGGTCGGCAC TTTTGCCGTC
AGCGCCGGTC CGGTCATGGC CTCCAGCAAC GAATTCAGGA TCGTCATCCG TGGCAAGGGC
AGCCATGCGG CCATGCCGAA CATGGGCATC GACCCGGTTC CGGCCGCCTG CCAGATGGTG
CTGGCCTTTC AGACCATCAT CAGCCGGAAT AAAAAACCGC TGGACACCGG CGTCATCTCG
GTCACGATGA TTCATGCCGG CGAAGCCACC AATGTGACTC CTGACTCCTG TGAACTCCAG
GGAACCGTGC GCACCTTCAG CACCGGGGTG CTGGACCTGA TCGAGCAGCG CATGAAAGCG
ATTGCCGAAC ACACCTGCGC AGCTTTCGAG GCGCAGTGCG AATTCGAGTT TTCGCGCAAC
TATCCGCCGA CCATCAACGC TGCGGCCGAA GCTGACTTTG CACGGCAGGT CATGGTGGAC
ATCGTGGGCG CGGACAAGGT GCTGGCCCAG GAGCCCACCA TGGGCGCCGA GGATTTCTCC
TACATGCTGC AGGCCAAGCC AGGCGCTTAC TGCTTCATCG CCAACGGCGA AGGCGAGCAT
CGGGAGATGG GTCACGGCGG CGGCCCCTGC ACGCTGCACA ACCCGAGCTA TGACTTCAAT
GACGAGCTGA TTCCCCTGGG CGGCACTTAC TGGGTGCAAC TGGCCAGCCG CTGGCTGAAC
ACGCCCGCCA GGGCTTGA
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| Protein sequence | MTLQASTLLR ASLASNSFLK VLNVKIIDSL ASGAAEIAAV RRDIHAHPEL CFEELRTADV
VARQLTGWGI PVHRGMGTTG VVGIVHGRDG GACGRGVGLR ADMDALPMQE FNTFAHASQH
AGKMHACGHD GHTAMLLAAA QHLSTHRDFD GTVYLIFQPA EEGGGGAREM IRDGLFEKFP
MEAVFGMHNW PGGAVGTFAV SAGPVMASSN EFRIVIRGKG SHAAMPNMGI DPVPAACQMV
LAFQTIISRN KKPLDTGVIS VTMIHAGEAT NVTPDSCELQ GTVRTFSTGV LDLIEQRMKA
IAEHTCAAFE AQCEFEFSRN YPPTINAAAE ADFARQVMVD IVGADKVLAQ EPTMGAEDFS
YMLQAKPGAY CFIANGEGEH REMGHGGGPC TLHNPSYDFN DELIPLGGTY WVQLASRWLN
TPARA
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