Gene Pnap_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1246 
Symbol 
ID4688332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1338561 
End bp1339109 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content57% 
IMG OID639834249 
Producthypothetical protein 
Protein accessionYP_981482 
Protein GI121604153 
COG category[S] Function unknown 
COG ID[COG3310] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.866657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATGA CCGACGAGGA TGTCCTGAAG CAGACCCGTC ACTGGCTTGA AAAAGCCGTG 
ATCGGCCTGA ACCTGTGCCC GTTTGCCAAG GCGGTTTACG TCAAGAACCA GGTTCGGCTG
GTCGTCAGCC AGGCCCGCCA TGCCGACGAC CTGCTCGAAG AGCTGGACCG CGAGCTTGAC
CTGCTGGTGG CCACGCCGGC GGAGGAAATC GACACGACGC TGCTGATTCA CCCGACGCTG
TTTGATGATT TTCTGGACTT CAATGATTTC CTGGAAATCG CCGAAGGCGT GCTGGACGAG
CATGCGCTCG AAGGCGTGGT GCAGCTGGCA AGTTTTCATC CGAAATTCCA GTTTGACGGC
ACCGAGCCAG ACGACATCAG CAATTACACC AATCGTGCGC CATTTGCTAT GCTTCATTTG
CTGCGCGAGG AAAGCATAGA CCGCGCGGTG CAGGCTTTTC CGCAAGCCGA AGCCATTTTT
GAAGAGAATA TCAAGACACT GGAAAAGCTG GGGCATTCCG GCTGGCGGGA TCTGGGTCTG
CATTCCTGA
 
Protein sequence
MSMTDEDVLK QTRHWLEKAV IGLNLCPFAK AVYVKNQVRL VVSQARHADD LLEELDRELD 
LLVATPAEEI DTTLLIHPTL FDDFLDFNDF LEIAEGVLDE HALEGVVQLA SFHPKFQFDG
TEPDDISNYT NRAPFAMLHL LREESIDRAV QAFPQAEAIF EENIKTLEKL GHSGWRDLGL
HS