Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1246 |
Symbol | |
ID | 4688332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1338561 |
End bp | 1339109 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639834249 |
Product | hypothetical protein |
Protein accession | YP_981482 |
Protein GI | 121604153 |
COG category | [S] Function unknown |
COG ID | [COG3310] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.866657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCATGA CCGACGAGGA TGTCCTGAAG CAGACCCGTC ACTGGCTTGA AAAAGCCGTG ATCGGCCTGA ACCTGTGCCC GTTTGCCAAG GCGGTTTACG TCAAGAACCA GGTTCGGCTG GTCGTCAGCC AGGCCCGCCA TGCCGACGAC CTGCTCGAAG AGCTGGACCG CGAGCTTGAC CTGCTGGTGG CCACGCCGGC GGAGGAAATC GACACGACGC TGCTGATTCA CCCGACGCTG TTTGATGATT TTCTGGACTT CAATGATTTC CTGGAAATCG CCGAAGGCGT GCTGGACGAG CATGCGCTCG AAGGCGTGGT GCAGCTGGCA AGTTTTCATC CGAAATTCCA GTTTGACGGC ACCGAGCCAG ACGACATCAG CAATTACACC AATCGTGCGC CATTTGCTAT GCTTCATTTG CTGCGCGAGG AAAGCATAGA CCGCGCGGTG CAGGCTTTTC CGCAAGCCGA AGCCATTTTT GAAGAGAATA TCAAGACACT GGAAAAGCTG GGGCATTCCG GCTGGCGGGA TCTGGGTCTG CATTCCTGA
|
Protein sequence | MSMTDEDVLK QTRHWLEKAV IGLNLCPFAK AVYVKNQVRL VVSQARHADD LLEELDRELD LLVATPAEEI DTTLLIHPTL FDDFLDFNDF LEIAEGVLDE HALEGVVQLA SFHPKFQFDG TEPDDISNYT NRAPFAMLHL LREESIDRAV QAFPQAEAIF EENIKTLEKL GHSGWRDLGL HS
|
| |