Gene Pnap_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1243 
Symbol 
ID4688237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1334134 
End bp1334640 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content65% 
IMG OID639834246 
Producthemerythrin-like metal-binding protein 
Protein accessionYP_981479 
Protein GI121604150 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2703] Hemerythrin 
TIGRFAM ID[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.123375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.910299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATC TTGAATGGTC CGATGCGCTG GCGCTCAATC TCCCCGTCAT GGACGACACG 
CACCGCGAGT TTGTCGAATT GCTCGCCGTG GTCGAAACCG CCAGCGACGA GACGCTGCTG
TCCCACTGGC GCACGCTGGT GGATCACACC GATGACCACT TCGGCCGCGA AGACCAGTGG
ATGCAGGCCA CGCGCTTTTC ATCGACCAAC TGCCACAGCG TGCAGCACAA GGTCGTGCTG
CAGGTCATGC GCGAAGGCAT TACGCATGCA TTGGCCGGCG ACCTGGGCGC CATTCGCCAG
ATGGCCCGCG AACTCGCCAT CTGGTTTCCG CAGCATGCGC AGACCATGGA TGCGGCGCTC
GCCCTGCACC TGCGCGGCAT CGGCTACGAC CCCGCAACCG GCATTGTCGC CATGCCCGAG
GCGCTGCCCA ACAGCATCAT CCACGGCTGC GGCGGCGCCA GCTGCTCCGA CAGCGAAACA
CCCGAGCCCG CAGCACAGGC TGCATGA
 
Protein sequence
MSNLEWSDAL ALNLPVMDDT HREFVELLAV VETASDETLL SHWRTLVDHT DDHFGREDQW 
MQATRFSSTN CHSVQHKVVL QVMREGITHA LAGDLGAIRQ MARELAIWFP QHAQTMDAAL
ALHLRGIGYD PATGIVAMPE ALPNSIIHGC GGASCSDSET PEPAAQAA