| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1207 |
|---|
| Symbol | |
|---|
| ID | 4689320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1290248 |
|---|
| End bp | 1291210 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639834210 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981443 |
|---|
| Protein GI | 121604114 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.133906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCAC GCACCGCCGA TCACCTGTTC TGGATGTCGC GCTACACCGA GCGCGCCGAA
AACACCGCCC GCCTGCTCGA TGTGAACTAC CAGACCTCGC TGCTGCCGCA ATCCACGGCC
GACGTGCAAA CCGGCTGGCG CGGCTTGCTC AGCATCAGCG AACTCAAGCC CGCCTATGCC
GCCAAGTACG GCGAAAGTAT CACCGCGCAA GATGTCATGG ATTTCATGGT GCGGGATGAA
AAAAATCCGT CCAGCATCGT GTCCTGCCTG CGCAACGCCC GCGAGAACGC GCGCGCCGTG
CGCGGCACGC TGACCACCGA GGTCTGGGAA ACCCAGAACC AGACCTACCT TGAAGTCATC
CGCATGCTGC GCCACGGCGA CTTCGAGCGC GACCCGGGCA AGTTCTTCGA ATGGGTCAAG
TTCCGTTCGC ACCTCTCGCG CGGCGTGACG GCCGGCACCA TGCTGCAGGA CGAAGCCTTT
CACTTCCTGC GCCTGGGCAC CTTCCTGGAG CGCGCCGACA ACACCGCCCG GCTGGTCGAT
GTGAAGTTCC ATGCGATTCA AAGCGACTTC CCGAGCGTTG CCGGCGAGGA GGAGCAGGAG
CATGATTTTT ACCACTGGAG CGCGATTTTG CGCAGCGTCT CGGCCTTCGA GGTCTATCGC
AAGGTGTACC GCGACGTCAT CAAGCCCGAG CGGGTGGCCG AGTTGCTGAT CCTGCGCCCG
GACATGCCGC GCTCGCTGCT GGGCTGCCTC AACGAGGTCA TCATGAACCT GTCCATGGTC
ACCAGCGACC CGCAGAGCGA AACCCAGCGC CGCGCCGGAA AACTGCGCTC GGACCTGCAG
TACGCCCGCA TCGACGAGAT TCTGTCGGCC GGCCTGCATG CCTTCCTGAT GCAGTTCCTG
GACCGCGTCA ATGAGCTTGG CGCGCACATC AGCCGGGAGT TCCTGGTTCC GGTCACGCGT
TGA
|
|---|
| Protein sequence | MLSRTADHLF WMSRYTERAE NTARLLDVNY QTSLLPQSTA DVQTGWRGLL SISELKPAYA
AKYGESITAQ DVMDFMVRDE KNPSSIVSCL RNARENARAV RGTLTTEVWE TQNQTYLEVI
RMLRHGDFER DPGKFFEWVK FRSHLSRGVT AGTMLQDEAF HFLRLGTFLE RADNTARLVD
VKFHAIQSDF PSVAGEEEQE HDFYHWSAIL RSVSAFEVYR KVYRDVIKPE RVAELLILRP
DMPRSLLGCL NEVIMNLSMV TSDPQSETQR RAGKLRSDLQ YARIDEILSA GLHAFLMQFL
DRVNELGAHI SREFLVPVTR
|
|---|
| |