| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1173 |
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| Symbol | |
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| ID | 4690134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1250507 |
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| End bp | 1251499 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834177 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_981410 |
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| Protein GI | 121604081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.397411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGCCCGT CGAACCTTGT TCGGATAGTC TGGAGGAATA CACACAAGGG CAAACCCGGA
TGGATTGCGG TTATTCTTCG CCCGGTGATT TACGCGCAGC TTCTTCTTCC CGACTTTTCG
CTCATTTTGT GCGGCTACCT GCTGTGCCGC CATACGCCCC TGAACCGCTC GGTCTGGAGC
CAGGTGGAAA GCCTGGTTTA CTACTTTTTA TTCCCGGTGC TGCTGTTCCA GTCGATTGTC
AAGACCCCAC TCGACCTGGG CGCCACTTCC AGCCTGATCG GCGCCGGCCT CACGCTGGGG
CTGGCGAGCA TTGCGCTGGC CTACAGCCTG CCCTATCTGC CCGGGCTGCG CCAGCATATT
GACCTTCGCG AGCATGCCGC CAGTGCCCAG GTGGCTTTTC GCTTCAACTC CTTCATCGGC
CTGGCGCTGG CCGAACGGCT GGCGGGCAGC CAGGGCCTGC AGCTGATCGC GGTGCTGATC
GGCGTGTGCG TACCGCTGTT CAACGTGGCG GCGGTGTGGC CCATGGCCCG GCACGCAGGG
CGCGGCTTCC TGCGCGAACT GGTGCGCAAC CCGCTGATCG TGGCCACCGC CTCGGGCCTG
GCGGCGAACC TGCTGGGCTT CAGCCTGCCG GACTGGTCGG TGCCGACGCT GTCGCGCATC
GGCGCGTCGT CCATCGTGCT GGGCCTGATG GCGGCGGGCG CCGGCATGCA GTTTGGGCAT
CTGTCGCAGG CCAAGACCCT GGCGGTGGCC GTGCTGTCGA TACGGCATTT CCTGCTGCCC
CTGATGGCGC TGGGCCTGAC CCGGGCGTTT GGCCTGTCTG CCGTGCAAAG CACGGTGTTG
ATGGCTTTTT CGGCCCTGCC GACGGCATCA AGCGCCTACG TGCTGGCAGC GCGCATGGGC
TACAACGGCG GCTACGTGGC CGGCCTGGTG ACCCTGTCCA CCCTGCTGGG CGTGGTGAGT
TTGCCGTTTG CGCTGGGCCT CTTGCGTTGG TGA
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| Protein sequence | MCPSNLVRIV WRNTHKGKPG WIAVILRPVI YAQLLLPDFS LILCGYLLCR HTPLNRSVWS
QVESLVYYFL FPVLLFQSIV KTPLDLGATS SLIGAGLTLG LASIALAYSL PYLPGLRQHI
DLREHAASAQ VAFRFNSFIG LALAERLAGS QGLQLIAVLI GVCVPLFNVA AVWPMARHAG
RGFLRELVRN PLIVATASGL AANLLGFSLP DWSVPTLSRI GASSIVLGLM AAGAGMQFGH
LSQAKTLAVA VLSIRHFLLP LMALGLTRAF GLSAVQSTVL MAFSALPTAS SAYVLAARMG
YNGGYVAGLV TLSTLLGVVS LPFALGLLRW
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