Gene Pnap_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1145 
Symbol 
ID4688601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1216802 
End bp1217308 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content73% 
IMG OID639834149 
Productferric uptake regulator family protein 
Protein accessionYP_981382 
Protein GI121604053 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCA TCCATCCTCC CGAACCCGCC GGCATCGACC CCATCGACGC GCTGCTGTCG 
GCCCACGGCC TGCGGCGCAC GGCGGCGGCC CGGCGGGTGC TGGGCTGGCT GCTGGCGCAC
CCGGACACCA GCTACACCCA CGCGCAGCTG CAGACGGCGC TCAGCGGCGA AGGCCCGTCG
GCGCTGGACC GCGTCACGCT GTACCGGCTG ATCGACCGCC TGACGCAGGT CGGCCTGCTG
CTGTGCCGGG TCGATGCCAG CCGCGTGCGC CGCTACCAGG CGATGCCGGT CAGCGTGCAT
GCCATTCCGC ACTTCGAATG CCAGAGCTGC CACCGCGACA GCCCGCTGGC CGGCGCGCTG
ATGGCCAATG CCGACGACCT GGAGCGCGCC GCGCAGTCGG CGCTGGCCGC GCTGCGGGCG
CTGGGCTACC AGGGGCTGAG CATGGACTTC GCGGTGCGCG GCGTCTGCGC CGACTGCGCC
ACCGCTGCGC CTGAAACGCT CCTGTGA
 
Protein sequence
MASIHPPEPA GIDPIDALLS AHGLRRTAAA RRVLGWLLAH PDTSYTHAQL QTALSGEGPS 
ALDRVTLYRL IDRLTQVGLL LCRVDASRVR RYQAMPVSVH AIPHFECQSC HRDSPLAGAL
MANADDLERA AQSALAALRA LGYQGLSMDF AVRGVCADCA TAAPETLL