Gene Pnap_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1069 
Symbol 
ID4687669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1135526 
End bp1136569 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content62% 
IMG OID639834069 
Productpeptide chain release factor 2 
Protein accessionYP_981307 
Protein GI121603978 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.624401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAG GGGGTATCTT TGACTACCCT GCCAAAGCCC GAAAACTGAA CGAAGTCAAC 
GCCGCGCTCG AAGACCCCAA GGTCTGGGAC AACCCCAAGC GTGCGCAGGA ACTCGGCCGC
GAGAAAAAAT CGCTCGAAGA CGTGGTGCTC ATCCTGGACC GGCTGGAGCA GGAACTGTCG
GACAACACGG AGCTGTTCGA GATGTCGAAG GACGACAACG ACGAAGCCGG CATGCGCGCC
ATCGAAGGCG AAGCCGCCAA GGTTGCCGCA GAGGTCGAGA AGATGGAATT TCGCCGGATG
TTCAACAACC CGGCCGACCC GCTCAATTGC TTCCTCGACA TCCAGGCCGG CGCCGGCGGC
ACCGAAGCCT GCGACTGGGC CAGCATGCTG CTGCGCCAGT ACCTGAAATA CGCCGAGCGC
AAGGGTTTCA AGACCACGAT TGAAGACGAG TCCGCTGGCG ACACCGCCGG CATCAAGGGC
GCGACCATCA AGATCGAGGG CGAGTACGCC TTTGGCCTGC TGCGCACCGA AACCGGCGTT
CACCGGCTGG TGCGCAAGTC GCCGTTCGAC TCGTCGGGCG GGCGCCACAC CTCGTTTGCC
TCGGTGTTCG TCTATCCGGA AATTGACGAC TCGATTGAAA TCGACATCAA CCCGGCGGAC
GTGCGCACCG ACACCTACCG CGCCAGCGGC GCGGGCGGCC AGCACATCAA CAAGACCGAT
TCGGCCGTTC GCCTGACGCA CATCCCGACC GGCATCGTCG TGCAGTGCCA GGAAGGCCGC
TCGCAGCACG GCAACCGCGA TGTCGCCTGG AAGCGCCTGC GCTCACGCCT GTATGACTTC
GAGTTGCGCA AGCAGCAGGA AGCGCAGCAA AAGCTCGAAG ACACCAAGAC CGACGTGGGC
TGGGGCCACC AGATCCGCAG TTATGTGCTG GACAACAGCC GCATCAAGGA CTTGCGCACC
AACTACGAAA CCTCGGCGAC GCAAAAAGTG CTGGATGGCG ACCTCGATCC GTTCATCGAG
GCGTCGCTGA AGCAAGGCGT CTGA
 
Protein sequence
MNSGGIFDYP AKARKLNEVN AALEDPKVWD NPKRAQELGR EKKSLEDVVL ILDRLEQELS 
DNTELFEMSK DDNDEAGMRA IEGEAAKVAA EVEKMEFRRM FNNPADPLNC FLDIQAGAGG
TEACDWASML LRQYLKYAER KGFKTTIEDE SAGDTAGIKG ATIKIEGEYA FGLLRTETGV
HRLVRKSPFD SSGGRHTSFA SVFVYPEIDD SIEIDINPAD VRTDTYRASG AGGQHINKTD
SAVRLTHIPT GIVVQCQEGR SQHGNRDVAW KRLRSRLYDF ELRKQQEAQQ KLEDTKTDVG
WGHQIRSYVL DNSRIKDLRT NYETSATQKV LDGDLDPFIE ASLKQGV