| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1058 |
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| Symbol | |
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| ID | 4686146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1116710 |
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| End bp | 1117777 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834057 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_981296 |
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| Protein GI | 121603967 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.14172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGG TGTACAGATA CCGGGTGAAG TCGCTCACTG GCTTGCTGAA CCAGCAAAGC
CGGGCGGTGA ACTTCGTCTG GAACTTCTGC AACGACCGGC AAAAAGACGC CTTGCGTTTT
GGCCGGCCCT GGCATACCGG GTTCGATCTG AACAAGCTCA CCAGCGGCGC TAGCCGTGAA
CTTGGGCTGC ATTCGGGTAC GGTGAACGCT GTGTGCGAGC AGTACGCCAA GTCGCGCAGC
CAGAAAAAGC GCCCCTGGTT GCGCTATCGC GGGAAGAAGT CCTTGGGCTG GGTGCCCCTC
AAGGGCCGCG AACTCAAGCG CGAAGGCGAT GCATTTCGCT TTGCGGGCAA CACTTTTCGC
GTATTCAACA GCCGCGCGCT GCCCGCAGGC AAGATCAAGG ACGGGACGAA CTTCTCCAGA
GACAGCCGGG GCCACTGGTT TTTGAACATC GTGATCGAGG TGCAAGCTGT TGCGGCTGAT
GTTCGCCAGC CCGTCAAGGG CGTTGGCATT GATTTGGGCC TCAAGGACTT CGCCACCCTG
TCCACGGGCG AGAAGATTAA AACCCAGCGC ATCTACCGGG GCGCCGAACA AGCGCTGGCA
GTTGCGCAGC GGGCGAACAA AAAGAAACGC GTCACGGCGA TACACGCGCA GATGGCCCAT
CGCCGCAACG ACTTTCACCA CCAGCTCAGC ACCCGGCTGG TGCGCGAGTT TGACTACATT
GCGGTGGGTA ACGTGAACGC CGCAGGACTT GCCAAAACGA CCATGGCCAA GTCCGTTCTC
GATGCGGGCT GGTCGTCCTT CAGAAGTCAA CTCGCGTACA AGGCTGTTAA GCATGGCGCG
TGGTTTGAAG AAGTGAGTGA GAGTTATACA ACCCAGACCT GTTCGGATTG CGGCGCCTTG
CCCGATTCGA GGCCGAAAGG TATCGCAGGC CTTGGAATAA GGAACTGGAC TTGTTCGGAG
TGTGGAGGTG TGCATGATCG CGATGTGAAT GCCGCCAGAA ATATCCTGAA GAAGTTTGGT
TCCCGTGCCG GGCATGGCAC GCCAGCAGTG GGAATCCCCG TCCTGTAG
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| Protein sequence | MILVYRYRVK SLTGLLNQQS RAVNFVWNFC NDRQKDALRF GRPWHTGFDL NKLTSGASRE
LGLHSGTVNA VCEQYAKSRS QKKRPWLRYR GKKSLGWVPL KGRELKREGD AFRFAGNTFR
VFNSRALPAG KIKDGTNFSR DSRGHWFLNI VIEVQAVAAD VRQPVKGVGI DLGLKDFATL
STGEKIKTQR IYRGAEQALA VAQRANKKKR VTAIHAQMAH RRNDFHHQLS TRLVREFDYI
AVGNVNAAGL AKTTMAKSVL DAGWSSFRSQ LAYKAVKHGA WFEEVSESYT TQTCSDCGAL
PDSRPKGIAG LGIRNWTCSE CGGVHDRDVN AARNILKKFG SRAGHGTPAV GIPVL
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