| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1007 |
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| Symbol | |
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| ID | 4686710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1062711 |
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| End bp | 1065065 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834006 |
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| Product | ABC transporter related |
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| Protein accession | YP_981245 |
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| Protein GI | 121603916 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.29536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACATC AGCACCTTCA GGACAAATCC AGTCCTGGCG ACCCCGCACT CGCAGGGCTT
CGCTCACAAC TGGCAACCGA AGAGAACGTC TTGTGTACGC TGCCGGTTGA CCTGGACCCG
CAACTTCGCT TTGCGCCCGG CCTGCTGGCC CTGACAAATC GCCGCCTGCT GGCCCAAAAT
GCCGATGGTG CCTGGTCAGA CTGGCTTCTC GGCGCCGCCG GCCAGCCCGC CCAGCAGCTC
GAACTGCGCC ATTTCGACCA TGCCGGCGTC GGAACCCTGG AACTGCATGA TAGCCACGGC
GAGTCGTCCC GCCGCCTGGC CAGCTGGCGT TTTACCCTGG GCGCGAATGT GCAGGCGCTG
CGCCTGGTGC GGCTGTTCGG GCAGCAGGCG CAAGGCCGGG CCGGCGCCGA GGCGCCCCTG
TGCCCGGAAT GCGAGGCGCC GCTGCCGCCC GATAGCGACG AATGCCCGGC CTGCACCCGC
GAAGTCCACA CGCCGCCCTC GACCTGGGTG CTGCTGCGGC TGTGGCGCTT TGCCCGGCCC
TACCGCTGGC AGTTGCTGTC GGGCTTTTTG CTGACGCTGG CCTCGACCGC CGCGACCCTG
GTGCCGCCCT ACCTGACGAT TCCGCTGATG GACGACATCC TGATCCCGTT CCAGAACGGC
CAGCAAATCG AGCCCGGCAA GGTCGGGCTG ATTCTGGGCG CGCTGCTGGG CGCGGCGCTG
CTGGGCTGGG CGCTGAACTG GGCGCGCACC TACCTGCTGG CGCTGGTGTC CGAGCGCATC
GGCGCCGATT TGCGAACCGC CACCTTCGAC CATCTGCTGG AGCTGTCGCT GGACTATTTT
GGCGCCAAGC GCACGGGCGA CCTGATGTCG CGCATCGGCT CCGAGACCGA CCGCATCTGC
GTGTTTTTGT CGCTGCACGC GCTCGATTTC GCCACCGACG TGCTGATGAT CGGAATGACC
GCCGTGATCC TGTTTTCGAT CAACCCGTAT CTGGCGCTGG CGACGCTCGT GCCGCTGCCC
TTCATCGGCT GGATGATCCA CGTGGTGCGC GACAAGCTGC GCACCGGCTT CGAGAAAATC
GACCGCGTCT GGTCGGACGT GACGAACGTG CTGGCCGACA CCATCCCCGG CATCCGCGTG
GTCAAGGCGT TCGCGCAGGA AAAACGCGAG GCGCAGCGCT TTCGCGTCGT CAACCAGCAC
AACCTGGCGG TCAATGACAA GCTCAACAAG GTCTGGTCGC TGTTCACGCC CACGGTGTCG
CTGCTGACCG AAATCGGCCT GCTGGTGGTC TGGGCGTTCG GCATCTGGCT GATGTCGAAG
CAGCAGATCA CGGTCGGCGT GCTGACCGCC TTCATCGCCT ACATCGGCCG GTTTTACGGC
CGGCTCGATT CGATGAGCCG GATTGTCTCG GTCACGCAAA AGGCGGCGGC TGGCGCCAAG
CGGATTTTCG ACATCCTCGA CCATGTCTCC AACGTCCCCG AACCCGCGCA GCCGGTGAAG
ATCGAAGCCC TGCAGGGCCG CATCGAGATG AAGGGCCTGG GCTTTCGCTA CGGCAACCGC
TCGGTGATTC GCGGGCTCGA TTTGCAGATT CAGCCCGGCG AGATGATCGG CCTGGTCGGC
CACAGCGGAT CGGGCAAAAG CACGCTGGTC AACCTGCTGT GCCGCTTCTA TGACGTGAGC
GACGGCAGCA TCCAGGTCGA TGGCACCGAC ATCCGGCGCT TTGCCGTGGC CGACTACCGG
CGCCACATCG GCCTGGTGCT GCAGGAGCCT TTTCTGTTCT TCGGCACGAT TGCCGAGAAC
ATCGCCTACG GCAAGCCCGG CGCCACGCGC GCCGAGATCG TCGCCGCCGC GCGCGCCGCC
CATGCGCATG AATTCATCCT GCGCCTGCCG CAGGCCTACG ACTCGCTGGT CGGCGAGCGC
GGCCAGGGGC TGTCGGGCGG CGAGCGCCAG CGCATCTCGA TTGCGCGCGC CTTGCTGATC
GACCCGCGCA TTTTGATTCT GGACGAGGCC ACCTCGTCGG TCGATACCGA GACCGAAAAG
GAAATCCAGA AGGCGCTGGA CAACCTGGTG CAGGGCCGCA CGACGATTGC GATTGCGCAC
CGGTTATCAA CGTTGCGCAA GGCCGACCGG CTGGTGGTGA TGGACCGGGG GCAGGTCGTG
GAAGTCGGCC CGCACGAGGA GCTGATGGCC AGGCAGGGCC ACTACTGGCG GCTGTACGAG
GCCCAACTGC GGCAGGTGGA CAGCGAAAGC GATGACACGG AAACGGCAGA AACGGCAGAA
AGCCTGGTCG CCGTGGCGAC TTCGCACCTG GAACACACCG CCCAGCATGC GCCGCAGCAG
GCCGGCAATT CGTGA
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| Protein sequence | MQHQHLQDKS SPGDPALAGL RSQLATEENV LCTLPVDLDP QLRFAPGLLA LTNRRLLAQN
ADGAWSDWLL GAAGQPAQQL ELRHFDHAGV GTLELHDSHG ESSRRLASWR FTLGANVQAL
RLVRLFGQQA QGRAGAEAPL CPECEAPLPP DSDECPACTR EVHTPPSTWV LLRLWRFARP
YRWQLLSGFL LTLASTAATL VPPYLTIPLM DDILIPFQNG QQIEPGKVGL ILGALLGAAL
LGWALNWART YLLALVSERI GADLRTATFD HLLELSLDYF GAKRTGDLMS RIGSETDRIC
VFLSLHALDF ATDVLMIGMT AVILFSINPY LALATLVPLP FIGWMIHVVR DKLRTGFEKI
DRVWSDVTNV LADTIPGIRV VKAFAQEKRE AQRFRVVNQH NLAVNDKLNK VWSLFTPTVS
LLTEIGLLVV WAFGIWLMSK QQITVGVLTA FIAYIGRFYG RLDSMSRIVS VTQKAAAGAK
RIFDILDHVS NVPEPAQPVK IEALQGRIEM KGLGFRYGNR SVIRGLDLQI QPGEMIGLVG
HSGSGKSTLV NLLCRFYDVS DGSIQVDGTD IRRFAVADYR RHIGLVLQEP FLFFGTIAEN
IAYGKPGATR AEIVAAARAA HAHEFILRLP QAYDSLVGER GQGLSGGERQ RISIARALLI
DPRILILDEA TSSVDTETEK EIQKALDNLV QGRTTIAIAH RLSTLRKADR LVVMDRGQVV
EVGPHEELMA RQGHYWRLYE AQLRQVDSES DDTETAETAE SLVAVATSHL EHTAQHAPQQ
AGNS
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