| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0912 |
|---|
| Symbol | |
|---|
| ID | 4689557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 965291 |
|---|
| End bp | 966013 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639833910 |
|---|
| Product | GTP cyclohydrolase I |
|---|
| Protein accession | YP_981150 |
|---|
| Protein GI | 121603821 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0302] GTP cyclohydrolase I |
|---|
| TIGRFAM ID | [TIGR00063] GTP cyclohydrolase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.447351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATGA AAACTACTCC GCCCTCACAG GATCTGACAG ACGAAGGAAC ACCTGTCTCC
GTCAAGATCC GCGAACGCCT GGTCATGGCA CGCAAGCGTT TCCATGCCAA TGACAACATC
GCCGAATTCA TCGAGCCGGG CGAGATGGAA AAATTGCTTG ACGAGGTCGA GATCAAGATG
CAGGGCGTTC TGGACAGCAT GGTGATCGAC ACCGTGGGCG ACCACAACAC CGGCAACACG
GCGCGCCGGG TTGCCAAGAT GTACCTGAAA GAGGTCTTCA ATGGCCGGTA TGTGACGGCG
CCGACCATCA CCGAATTCCC CAATGCAGAG CACCTGAACG AGTTGATGAT CGTCGGGCCA
ATCACCGTTC GCAGCGCCTG CTCGCACCAT TTCTGCCCGG TCATCGGCAA GATCTGGATT
GGCGTTCTGC CCAACGAGCA TACCAACGTG ATCGGCCTGT CCAAATACGC GCGGCTGGCC
GAGTGGGTCA TGGGCCGTCC GCAAATCCAG GAAGAGGCCG TGGTGCAACT GGCCGACCTG
ATCATGGAAA AAACCCAGCC CGACGGGCTG GCCATCGTGA TGGAAGCCAG CCACTACTGC
ATGGCCTGGC GCGGCGTCAA GGACATGGAC AGCAAGATGA TCAACTCGGT CATGCGCGGC
GTGTTCCTGA AGGATTCGAC CTTGCGCCGC GAGTTTCTCG CGCTTATTCC AAGAAAAGGG
TAA
|
|---|
| Protein sequence | MLMKTTPPSQ DLTDEGTPVS VKIRERLVMA RKRFHANDNI AEFIEPGEME KLLDEVEIKM
QGVLDSMVID TVGDHNTGNT ARRVAKMYLK EVFNGRYVTA PTITEFPNAE HLNELMIVGP
ITVRSACSHH FCPVIGKIWI GVLPNEHTNV IGLSKYARLA EWVMGRPQIQ EEAVVQLADL
IMEKTQPDGL AIVMEASHYC MAWRGVKDMD SKMINSVMRG VFLKDSTLRR EFLALIPRKG
|
|---|
| |