Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0840 |
Symbol | |
ID | 4687427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 888926 |
End bp | 889900 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639833835 |
Product | hypothetical protein |
Protein accession | YP_981078 |
Protein GI | 121603749 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.270486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCA CATCCCTGTT CAAGACCCTC GCCGTCTCGG CGTGCCTGGT CGCGGTTCCG ACCCTGGCAT CGGCCCAGGC CTACCCGACC CACGCCATCA GGATCATCGT GCCCGCCCCG CCGGGCGGCG CTATCGACAC CATTGCCCGC GTCGTCGGAG ACAAGATCGG GGCCTCGATG GGGCAGCCGG TGATCGTCGA CAACCGTCCC GGCGCATCCA ATAACCTCGG CACGGATGTC CTGGCCAAAT CAGCGCCCGA TGGCTACACC ATCGGCATCG TGGGCGGCAG CCACAACACC AACAAGTTCC TGTTCAAGAA CCTGGGCTGG GATCCGGAGA AAAGCTTCGA GCCCATCGTC TACACCCACG AGGTTCCTCT GGTGTTCGCC ATCTACCCGC AGATTCCCGC CAAGACACTG CCCGAGTTCG TGGCCTGGAT GAAGGCCAAT CCAGGCGAGG CCAAGGTGGC CACCTCTGGC CGCGGCAGCG CGCAGGAAAT GGCGGCCGAG ATGTTCCGCA TGGCCAGCGG CGCGCCCATG CTGCTGGTGC CCTACAAGGG CTCTTCGGCC GCTCACCCGG ATCTGCTGGC CGGGCGCACC GCGCTCTACA TCGACACCAT CAGCGCCATC CAGTCGCAGG TCAAAGCCGG CAACGTGCGA GCCGTTGCAG TGTCAACCCG CAAGCGAAGC ATGTCTTTGC CGGACGTGCC GACCGCGAAC GAACAGGGGC TCAAGGGCTA CGACGCCAAC ACGAATGGCG GCTTCCTGGC ACCGGCCGGC ACGCCCAAGG CGATTGTCGC CAAGCTCAAT GCCGAGATCA ACGCGGCGCT CAAGCTGCCC GACGTGCGGG CCAAGCTGGA GGCAGCCGGT ATCGAGATCC AGGGCGGAAC GCCGCAGGAG TACGCCGCGC TGATCAAGTC CGACCTCGCC AAGTGGGGCA AGGTCGTCAA GGACGCGGGC ATCCAGCCGG AGTGA
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Protein sequence | MQLTSLFKTL AVSACLVAVP TLASAQAYPT HAIRIIVPAP PGGAIDTIAR VVGDKIGASM GQPVIVDNRP GASNNLGTDV LAKSAPDGYT IGIVGGSHNT NKFLFKNLGW DPEKSFEPIV YTHEVPLVFA IYPQIPAKTL PEFVAWMKAN PGEAKVATSG RGSAQEMAAE MFRMASGAPM LLVPYKGSSA AHPDLLAGRT ALYIDTISAI QSQVKAGNVR AVAVSTRKRS MSLPDVPTAN EQGLKGYDAN TNGGFLAPAG TPKAIVAKLN AEINAALKLP DVRAKLEAAG IEIQGGTPQE YAALIKSDLA KWGKVVKDAG IQPE
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