Gene Pnap_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0840 
Symbol 
ID4687427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp888926 
End bp889900 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID639833835 
Producthypothetical protein 
Protein accessionYP_981078 
Protein GI121603749 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.270486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCA CATCCCTGTT CAAGACCCTC GCCGTCTCGG CGTGCCTGGT CGCGGTTCCG 
ACCCTGGCAT CGGCCCAGGC CTACCCGACC CACGCCATCA GGATCATCGT GCCCGCCCCG
CCGGGCGGCG CTATCGACAC CATTGCCCGC GTCGTCGGAG ACAAGATCGG GGCCTCGATG
GGGCAGCCGG TGATCGTCGA CAACCGTCCC GGCGCATCCA ATAACCTCGG CACGGATGTC
CTGGCCAAAT CAGCGCCCGA TGGCTACACC ATCGGCATCG TGGGCGGCAG CCACAACACC
AACAAGTTCC TGTTCAAGAA CCTGGGCTGG GATCCGGAGA AAAGCTTCGA GCCCATCGTC
TACACCCACG AGGTTCCTCT GGTGTTCGCC ATCTACCCGC AGATTCCCGC CAAGACACTG
CCCGAGTTCG TGGCCTGGAT GAAGGCCAAT CCAGGCGAGG CCAAGGTGGC CACCTCTGGC
CGCGGCAGCG CGCAGGAAAT GGCGGCCGAG ATGTTCCGCA TGGCCAGCGG CGCGCCCATG
CTGCTGGTGC CCTACAAGGG CTCTTCGGCC GCTCACCCGG ATCTGCTGGC CGGGCGCACC
GCGCTCTACA TCGACACCAT CAGCGCCATC CAGTCGCAGG TCAAAGCCGG CAACGTGCGA
GCCGTTGCAG TGTCAACCCG CAAGCGAAGC ATGTCTTTGC CGGACGTGCC GACCGCGAAC
GAACAGGGGC TCAAGGGCTA CGACGCCAAC ACGAATGGCG GCTTCCTGGC ACCGGCCGGC
ACGCCCAAGG CGATTGTCGC CAAGCTCAAT GCCGAGATCA ACGCGGCGCT CAAGCTGCCC
GACGTGCGGG CCAAGCTGGA GGCAGCCGGT ATCGAGATCC AGGGCGGAAC GCCGCAGGAG
TACGCCGCGC TGATCAAGTC CGACCTCGCC AAGTGGGGCA AGGTCGTCAA GGACGCGGGC
ATCCAGCCGG AGTGA
 
Protein sequence
MQLTSLFKTL AVSACLVAVP TLASAQAYPT HAIRIIVPAP PGGAIDTIAR VVGDKIGASM 
GQPVIVDNRP GASNNLGTDV LAKSAPDGYT IGIVGGSHNT NKFLFKNLGW DPEKSFEPIV
YTHEVPLVFA IYPQIPAKTL PEFVAWMKAN PGEAKVATSG RGSAQEMAAE MFRMASGAPM
LLVPYKGSSA AHPDLLAGRT ALYIDTISAI QSQVKAGNVR AVAVSTRKRS MSLPDVPTAN
EQGLKGYDAN TNGGFLAPAG TPKAIVAKLN AEINAALKLP DVRAKLEAAG IEIQGGTPQE
YAALIKSDLA KWGKVVKDAG IQPE