Gene Pnap_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0687 
Symbol 
ID4689622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp735933 
End bp736442 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content55% 
IMG OID639833681 
Producthypothetical protein 
Protein accessionYP_980927 
Protein GI121603598 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCT CAAAAATTGA TGTGTGGGTT GGCCTGTTTG TCCTGGTGGG CGCAGCGGCC 
ATTTTGTTTC TGGCTTTGCA GGCCGCCAAT CTGCTGAACC TGAATTTCCA GCCCACTTAC
AGGATCACGG CCGAATTTGA CAATATTGGC GGGCTCAAGA CCAAGGCTTC GGTGCGCAGC
GGTGGCGTGG TGGTGGGACG GGTCGAGGAG ATCAGCTTTA ACGACCAGAC CTTCCAGGCG
CGTGTCACGC TGGACATGCA GGGCCGCTAT GCTTTCCCCA AGGACAGTTC GCTGAAAATT
CTGACCAGCG GCTTGCTCGG CGAGCAATAC ATTGGCATCC AGGCGGGCGG CGATGAAAAA
AACCTTGTGG AAGGCGACGT GATCAGGCAG ACACAGTCTG CCGTGGTGCT TGAAAATCTG
ATTGGACAAT TTTTGTTCAG CAAGACAGCC GATGAAAGTT CAGGGTCAGC CCCGACCCTG
CCAGCAACAG GAGCAACAGA AAAAAAATGA
 
Protein sequence
MQRSKIDVWV GLFVLVGAAA ILFLALQAAN LLNLNFQPTY RITAEFDNIG GLKTKASVRS 
GGVVVGRVEE ISFNDQTFQA RVTLDMQGRY AFPKDSSLKI LTSGLLGEQY IGIQAGGDEK
NLVEGDVIRQ TQSAVVLENL IGQFLFSKTA DESSGSAPTL PATGATEKK