| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0527 |
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| Symbol | |
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| ID | 4687508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 555398 |
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| End bp | 557479 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639833523 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_980769 |
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| Protein GI | 121603440 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.379018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATACA AATTTCTTTG CAGCGCGGCA GTTTTAGCCG CACTGGTCGC GCCAGCCCTG
GCGCAAAGTC CTTCCACCGC CCTGCCGCCG GGCGCCAATG CCGCCGGCGA CAGCCTGATC
GTGGAGATGA ACAAAGCCTT CAAGCGCGGC GACAAGGGCC GGCTGACGCA GCTGCTGCCG
CAGGCCCGGG GCCATGCGCT GGAGCCGTGG GCGGCTTACT GGGAACTCAA GGCCAGGCTG
GGCGAAGCCA GCCCGCAGGA AGTGCAGGAC TTCCTGGCGC GCTATGCCGG CAGCTACCAG
GAAGACCGGC TGCGCAACGA CTGGCTGCTG CTGCTGGGCC AGCGCCGCGA CTGGGCCAGC
TTTTCCGCCG AATACCCGAA GTACCGAATG AACGACGACC GCGAGCTGCG CTGCTACGCG
CTGCTGGTCG AACACCTGAA AAACCCGACG CAGGACGCGC GCCTGTCGGG CGAGGTGCGC
AAGAACTGGT ACGCCCAGCG CGATGCCGAC GACGGCTGTA CCGCCGCCGC CGAGCGGCTG
GTGGGCAGCA ACAACCTGAC GCCGCTCGAT GTCTGGCAAA AGGCCAGGCT GGCGCTGGAA
GCCAACCGGC CCAAGGCGGC CAGCAACGCC GTGGCCATCG TCGCGCCCGA GGCGCTGGGC
ATGGTGGCCG AGCTGAACAG CAGCCCGATC AAGTTTTTGG CCGGCAAATA CCTGGCGCTG
CGCACGGTGC GCAAGGAAAT CATCACGCTG GCGCTGGTCA AGCTGGCCAT CAGCGACTCC
GAAGGCGCCG CCTCCCAGCT CGACGGCAAA TGGGCGCTGC AGCTCACCGC CGAGGAACGC
AACTGGCTCT GGGGCCTGAT CGGCAAGCAG ACCGCCAGCC GCATGGGCAC GCAGCCGGCC
GGCGATGCGC TGCAGTATTA CGCCCGGGTC ACCAAGGACG CCGACCTGAC CGACGACATG
CTGGCCTGGA AGGCGCGCGC CGCCCTGCGC GCCGGCACCC AGCCCAGCTG GCAGCTGGTC
CTTGCGGCCA TCAACGCCAT GAGCGAGGAC GGCCGCAAGG AGCCGGTCTG GACCTACTGG
AAAGCACGCG CGCTGCTGGC CATGTCGCCG CCTGACATCG CCACCGCCGT GGTCACGCCG
CAAGGCCCGG CGACCACCAC CGTCATGGCG CCGCAGCGCA TCGAAGGGCT CAGGCTGCTG
CAGTCGATCG CCTCGGCGAG CGGCTTTTAC GAGCAGCTGG CGCTCGAAGA CCTGGGCCTG
AAAATCTCCG TGCCGCCCAA GCCGGCGCCG CTCACCGCGC AGGAAAAAGA CGCCGCTCGG
CTCAACCCCG GATTGAGCCG GGCCACCTAC GCCATCATGA TCGGCCTGCG CTCCGAAGGC
GTGCGCGAGT GGAACTACGC CACCAACCTG CACCAAAAGA GCGGCATGGG CGAGCGCGAA
CTGCTGGCCG CCGCCCAGGT GGCCTGCGAC CGCCAGATCT GGGACCGCTG CATCAACACC
AGCGAGCGCA CCACCAGCGT GGCCGACTTC GAGCAGCGCT TTCCGATGCC GTTTCAGGCC
GCCGTGGTCA AGCGCAGCCA GTCCATCAAC CTCGACCCGG CCTATGTCTA TGGCCTGATC
CGCCAGGAAA GCCGCTTCAT CATGGACGCC CGCTCCGGCG TGGGCGCCTC CGGCCTGATG
CAGGTGATGC CCGCCACGGC GCGCTGGACC GCCAACAAGA TCGGCCTCGA CGGCTTCACG
CCCGAGCAGA TCAACGACCG CGACACCAAC ATCACCATCG GCACGGCTTA TTTGAAGCTG
GCGCTCGACG ACCTGGGCGG CTCGATGCCG ATGGCCGCCG CAGCCTACAA CGCCGGACCG
GGCCGGCCGC GCACCTGGCG CAACGGCCAT GTGCTCGACG CCGCCATCTG GGCCGAGAAC
GTGCCCTTCG CCGAAACCCG CGACTACGTG AAGAAAGTGC TGTCCAACAC CACCAACTAC
GCGGCCATCC TGACGGGCCA GCCGCAGTCG CTGAAAAGCC GGCTGGGCAT GATCGGGCCG
CGCGATGCGA GCATGCCGGA GCCGTACATG GACCTGCCCT GA
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| Protein sequence | MLYKFLCSAA VLAALVAPAL AQSPSTALPP GANAAGDSLI VEMNKAFKRG DKGRLTQLLP
QARGHALEPW AAYWELKARL GEASPQEVQD FLARYAGSYQ EDRLRNDWLL LLGQRRDWAS
FSAEYPKYRM NDDRELRCYA LLVEHLKNPT QDARLSGEVR KNWYAQRDAD DGCTAAAERL
VGSNNLTPLD VWQKARLALE ANRPKAASNA VAIVAPEALG MVAELNSSPI KFLAGKYLAL
RTVRKEIITL ALVKLAISDS EGAASQLDGK WALQLTAEER NWLWGLIGKQ TASRMGTQPA
GDALQYYARV TKDADLTDDM LAWKARAALR AGTQPSWQLV LAAINAMSED GRKEPVWTYW
KARALLAMSP PDIATAVVTP QGPATTTVMA PQRIEGLRLL QSIASASGFY EQLALEDLGL
KISVPPKPAP LTAQEKDAAR LNPGLSRATY AIMIGLRSEG VREWNYATNL HQKSGMGERE
LLAAAQVACD RQIWDRCINT SERTTSVADF EQRFPMPFQA AVVKRSQSIN LDPAYVYGLI
RQESRFIMDA RSGVGASGLM QVMPATARWT ANKIGLDGFT PEQINDRDTN ITIGTAYLKL
ALDDLGGSMP MAAAAYNAGP GRPRTWRNGH VLDAAIWAEN VPFAETRDYV KKVLSNTTNY
AAILTGQPQS LKSRLGMIGP RDASMPEPYM DLP
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