| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0472 |
|---|
| Symbol | |
|---|
| ID | 4689998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 493424 |
|---|
| End bp | 493945 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639833469 |
|---|
| Product | DinB family protein |
|---|
| Protein accession | YP_980715 |
|---|
| Protein GI | 121603386 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2318] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.772999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCA ATGTTTATTT CGCCACCCTG GCGCGCTACA ACGTCTGGGC CACGCAGCGG
CTGCTGGAGG CGGTGGCCGA TGTACCGGAT GACGGCTACC GGTGCGATGC GGGCCTGTTC
TTTCGCAGCA TCCACGGCAC GCTGGCCCAT CTGCTGGTGG GCGAGCACCA GCTGTGGTTT
CGCCGCTTTG CCGAAGGCGT CTCGCCCGTG GTGGCGCTCG ATGCGGACCT GGTGCCCGAG
CGGCAGGCGC TGGCCGCGCA GCTGCTGGCC GGGGCGCGCC GCTGGGAGCC GCTGGTTGCC
AGCCTGCCGC CCGAGCGCTT CGACGGCCTG CTGAACTACA CCACCATGCG CGGCCAGCCG
GCTTCGCTGC CGTTTGCCGC CACGCTGGGG CATGTCTTCA ATCACGGCAC GCACCATCGC
GGCCAGATCA CGGCCGCACT CACCGCACTG GGCCGGCCTT GCCCGGAGCT GGACATGGTG
TATTTTTTGC AAACCCAGCC ACACCAGGAG TCACCCGCAT GA
|
|---|
| Protein sequence | MNLNVYFATL ARYNVWATQR LLEAVADVPD DGYRCDAGLF FRSIHGTLAH LLVGEHQLWF
RRFAEGVSPV VALDADLVPE RQALAAQLLA GARRWEPLVA SLPPERFDGL LNYTTMRGQP
ASLPFAATLG HVFNHGTHHR GQITAALTAL GRPCPELDMV YFLQTQPHQE SPA
|
|---|
| |