| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0452 |
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| Symbol | |
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| ID | 4688439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 472986 |
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| End bp | 474545 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639833449 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_980695 |
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| Protein GI | 121603366 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAT TTCTGGACAA GTTCCGGTTG ACCCCCGCAG GTAACTTGCC CGACGTGAGC
TTGCAGAGCG CCAATTCCAG CCTGCCGGCA GCGCAGCCAG AATGGGGACC CCTGGACCTG
ACCCTCGATG GCATCGTGCT TCTTGACGAC AAAGCCGTCA TCCTTGACGC CAATGCTCCG
GCGCTTGAGT TCCTGCACAC CTCGCTGTCC GCCATCAGCG GCTACAGCTT GTGGGACGTG
GTGCCCGAGG AAGTTGCCAA GCAGAATGAA GAGGCCACCG AACTGGCTCT GGATTCTGCG
GACCGGCATA GCTTTATTGC CCATGAGAGT TTTGAAAACA GTTGGGTCGA ATACACCTTC
AGGCGATGCC CGGCAGGTTA CGTCGTCAAC CTGCGCGAAG CGGGTCCGGC CCAAAAATAC
CAGCGCCTGC TGGAAGACAG CAAACGCTAC AACCAGCTGA TTTTTGAAGC CAATCCGAAT
GTCATGTGGG TCTTTGACCG GACCACGCTT CGAATCTTTG CCGTCAACCA GGCTGCCGTC
AAGTTTTACG GCATTGCCCG CAAGATTTTC ATGACGCTTG GCATGGAAGC GCTCTTTCCC
CAGGGAGAAG GCGCCGAACT GCTGCGCTCC CTGCACACCG GCAAGGAAGA GCAGTCTGAA
ATGCGGCTGT GCAAACAGAA AAAAATGGAC GGCAAGGAAG TGCTGGTTGA GCTGGCCTGG
AGCCAGGTCA AGTGGGATGG CCATCAGGCG GTGCTGGTGA GCCTGGCCGA CATCAGTGAC
CGGCACCTCG CTGACGGCGT CCTGAAAAAA ACCAATGAGG AATTGCAAAA GACACTCGTC
GCCCAGCAGG TCGAACTGAA AAATGTCCGG CATGACCTGC TCACCTTTAC CCAGGCCGTC
TCCAGTGACT TGCAGGACTC CCTGCATGCG GCCCATGGCT TTGCCGCCAG GCTGGCTGAA
AAGTATTCGC TGGCGCTGGA CGACCAGGGC CGCCACTATG TCAGGCGCAT TCAGGCCAGC
ATCAGCCAGT TGGCCAAGCT GGTCGATGAC CTGCGAACAC TCGCCCAGCT GCCGCTGCGC
TCCGGAGTTC CTGCAATGGT CAATCTGGCA CCGGTCTGCC TTTCATTGAT CGCTGATTTG
CGCAAGCGCG ACCCGGACCG GGATGTGACC ATCGAAATGG ACAGCAAGCT GATGCTGGTC
GGGAACAAGG GGCTTTTGAC GACAGCCATG ACCTGCCTGC TGGAAAATGC CTGGAAATTC
ACCTCCAAAA AGACCGAGGC ATGGATCAAG GTCGGGCTGC TGCCCGGCAA GGCGCCGGGT
GAGCTGGTGT TGCTGGTGGC CGATAATGGC GCCGGATTTG ATCCGGTTTA CAGCGGCAAT
CTTTTCACCG CGTTTCAGCG CCTGCACTCT TCAGCCGACT TTCCGGGCAA CGGGCTGGGG
CTGGCCATCA TCAAGCGGGT TGCGCAGGTG CATGGCGGCA CGGTATGGGC TGAAAGTCCG
GGCCAGGGGG GGGCCAGTTT TTTCATGTCG CTTCCGCAAG GGGAAGCCAG CGCTTCCTGA
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| Protein sequence | MSRFLDKFRL TPAGNLPDVS LQSANSSLPA AQPEWGPLDL TLDGIVLLDD KAVILDANAP
ALEFLHTSLS AISGYSLWDV VPEEVAKQNE EATELALDSA DRHSFIAHES FENSWVEYTF
RRCPAGYVVN LREAGPAQKY QRLLEDSKRY NQLIFEANPN VMWVFDRTTL RIFAVNQAAV
KFYGIARKIF MTLGMEALFP QGEGAELLRS LHTGKEEQSE MRLCKQKKMD GKEVLVELAW
SQVKWDGHQA VLVSLADISD RHLADGVLKK TNEELQKTLV AQQVELKNVR HDLLTFTQAV
SSDLQDSLHA AHGFAARLAE KYSLALDDQG RHYVRRIQAS ISQLAKLVDD LRTLAQLPLR
SGVPAMVNLA PVCLSLIADL RKRDPDRDVT IEMDSKLMLV GNKGLLTTAM TCLLENAWKF
TSKKTEAWIK VGLLPGKAPG ELVLLVADNG AGFDPVYSGN LFTAFQRLHS SADFPGNGLG
LAIIKRVAQV HGGTVWAESP GQGGASFFMS LPQGEASAS
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