| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0412 |
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| Symbol | |
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| ID | 4686756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 421048 |
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| End bp | 422730 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833405 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_980656 |
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| Protein GI | 121603327 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.127464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000145574 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACCC CTGCCGCGCT GCGCCCCTGC CCTGTCCCGA CCGCACCAGC ACCTCGTCTT
CACCGTGCCC GGCAGTGGCT GTGCCTGGTT TTTTTGAGCT TCTGGGTGAC CGGATGCGCC
TCCTTGCCAA GCACCGTGGA TCGCCCGGTT TCAACGGCGC TGGCCAACCC GATGGAAACC
CGCCTGGGCC GGCTGGTGCA GGCCCGTGCG GACAAGGCCG GCACCCATAA CGACTCCGGC
TTTGCACTGG TGGGCAATGC CGAGCTGGCT TTTACCAGCC GCATGACGCT GATCAAGGCC
GCGCAGAAAA CGCTGGACAT CCAGTATTAC GCGATTTTTG CCGACGATAC CACCGAACGC
ATGTTTGACG CGCTGCGTGA CGCGGCCGGG CGCGGCGTGC GCATCCGCAT CCTGCTGGAC
GACTTCAACA CCTCGGGCAA AAACGCGCAG GTCTTGAAGC TGGCCTTTGA AAAGAATTTT
GAACTGCGCC TGTTCAACCC GCTGCCGGGC GGGCGCGGCT CCATGATGCT GCGAATCCTG
AGCAACCTCA AGGACGTGGC GCGCATGCAG CGGCGCATGC ACAACAAGAT TTTCGTCGCT
GACAACGCGG TCGCCATCAC CGGCGGGCGC AACCTGGGCG AAACCTATTT TGGCCAGAGC
GAAGGCACCA ACTTCGTGGA CATCGACGTG CTGGCAGCCG GCCGCATCGC GCGCGATTTG
TCGCGCAGCT TTGACCAGTA CTGGAACAAC CCGCTGGCCT ATCCGGTGCA GTCGCTGATG
ACAGCCAAGG AAATTGAGTT GCTCAAGCCA AAACTGGCAG CCGCCAGTCC CGAAGCGCCG
TCAGGCACCC CGCAACCCAT GGCAGTAGCA GCCAGCCCAA CGCTGGCAAA AACCCTCACG
GCGGCGCCCA ATGAGGCAAC GGCCCTGCCC GACTCAACCG ACCTCAGCCT GTTGACCTGG
ACCTGGGCAC CGTCTGTGTT GCTGGTGGAC CAGCCTTCCA AGATTGCCGC TGACGCCGAC
GACGTGGCCG AAGCGCAGGA AACGGCCGTC GATGGCCTGC TGCAACTCAT GTCGCAGGCG
AAAACCGATC TGCTGATCGT CTCGCCCTAT TTTGTTCCGG GCGAACTCAT GATGGGCCAG
TTTGCCGAGT TGCGGCGGCG CGGCGTGCGG GTGCGGCTGC TGACCAATTC GCTGGCGTCC
AACGATGCGC CCGCCGCGCA CGTCGGCTAC GCCCGCTACC GTGAAGCGCT GCTGGCGATG
GGGATTGAGC TTTATGAAAT GCGCGCCGAG CAGGAAGGCA CCGTCAGGAG CTTCCGGTGG
GGCGCGGGTT CAACCGGCGG TTCCACCAGC GGCTCACGCG CCAGCCTGCA CGCCAAGGTG
GTGGTGATGG ACAGTCGCCT GCTGGTGGTG GGTTCGATGA ACCTGGACCT GCGCTCGAAA
CTGCAAAACA GCGAGGTCGC GATCATCATC CGCAACCGCA CGCTATCTCA GGAGGCCACG
CGCATGATCG AACCGGCGCT GACGAGCGGG GCCTACCGGG TGGAACGGGT CAACGGGCAA
CTGGTCTGGC GCGCGCCGCA AGGCTCGGGA CTCAAGGATT CGACAAGCGA GCCCGATGCC
AGCCTGACCT TGAGGCTGTT GCTCAAGCTG ATCGGGCCTT TCGCGCCTGA CGAGATGCTT
TGA
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| Protein sequence | MQTPAALRPC PVPTAPAPRL HRARQWLCLV FLSFWVTGCA SLPSTVDRPV STALANPMET
RLGRLVQARA DKAGTHNDSG FALVGNAELA FTSRMTLIKA AQKTLDIQYY AIFADDTTER
MFDALRDAAG RGVRIRILLD DFNTSGKNAQ VLKLAFEKNF ELRLFNPLPG GRGSMMLRIL
SNLKDVARMQ RRMHNKIFVA DNAVAITGGR NLGETYFGQS EGTNFVDIDV LAAGRIARDL
SRSFDQYWNN PLAYPVQSLM TAKEIELLKP KLAAASPEAP SGTPQPMAVA ASPTLAKTLT
AAPNEATALP DSTDLSLLTW TWAPSVLLVD QPSKIAADAD DVAEAQETAV DGLLQLMSQA
KTDLLIVSPY FVPGELMMGQ FAELRRRGVR VRLLTNSLAS NDAPAAHVGY ARYREALLAM
GIELYEMRAE QEGTVRSFRW GAGSTGGSTS GSRASLHAKV VVMDSRLLVV GSMNLDLRSK
LQNSEVAIII RNRTLSQEAT RMIEPALTSG AYRVERVNGQ LVWRAPQGSG LKDSTSEPDA
SLTLRLLLKL IGPFAPDEML
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