Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0404 |
Symbol | |
ID | 4686507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 403967 |
End bp | 404509 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639833397 |
Product | hypothetical protein |
Protein accession | YP_980648 |
Protein GI | 121603319 |
COG category | [S] Function unknown |
COG ID | [COG4719] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.825315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0195046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAAC CCACGGTCGC AGCCAGCAAG GCCGCCGCTT CGGCCGCTGC GCCGGCGGTG GTTAAAGCTG TCTCGGTTGA GTTGACGCAA TTCAAGGTGG TCAAGGATGC CAAGGGCGTA GAGCAATTGG TTGCTGCTCC CTCTGTGATG CCTGGTGACG TGATTGAATA CAAGGTCACC TACAAAAACA CCAGCACCAA GTCCGTTGGG GGCTTGGTGG CCGATCTGCC GATTCCCGAA GGCCTGGAAT ATCTGCCCAA GAGCGCCAAG CCGGGGGCCG CGCTGGTCAA AGCCGCAGCC AAGGACGGTG AATACGCCGC TGAGCCGCTG ATGCGCAAGC TGCCTGGCAA CAAGAGCGAG CCGGTGCCTT ACAACGAATA CCGCGCCTTG CGCTGGAGCC TGGGCGAGTT GCCTGCAGGC GGTGTTGCTG CAGTCACGGC ACGCGCCAAG GTTGAAGCGG TGGTTCCCAC ACCACCCAAA ACCGCGCCAG CTTCAGTCCC GTCTTCCGCC GTCACCGTGA AGCCTGCCAG CGCAGCCCGC TGA
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Protein sequence | MAQPTVAASK AAASAAAPAV VKAVSVELTQ FKVVKDAKGV EQLVAAPSVM PGDVIEYKVT YKNTSTKSVG GLVADLPIPE GLEYLPKSAK PGAALVKAAA KDGEYAAEPL MRKLPGNKSE PVPYNEYRAL RWSLGELPAG GVAAVTARAK VEAVVPTPPK TAPASVPSSA VTVKPASAAR
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