Gene Pnap_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0404 
Symbol 
ID4686507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp403967 
End bp404509 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID639833397 
Producthypothetical protein 
Protein accessionYP_980648 
Protein GI121603319 
COG category[S] Function unknown 
COG ID[COG4719] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.825315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0195046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAC CCACGGTCGC AGCCAGCAAG GCCGCCGCTT CGGCCGCTGC GCCGGCGGTG 
GTTAAAGCTG TCTCGGTTGA GTTGACGCAA TTCAAGGTGG TCAAGGATGC CAAGGGCGTA
GAGCAATTGG TTGCTGCTCC CTCTGTGATG CCTGGTGACG TGATTGAATA CAAGGTCACC
TACAAAAACA CCAGCACCAA GTCCGTTGGG GGCTTGGTGG CCGATCTGCC GATTCCCGAA
GGCCTGGAAT ATCTGCCCAA GAGCGCCAAG CCGGGGGCCG CGCTGGTCAA AGCCGCAGCC
AAGGACGGTG AATACGCCGC TGAGCCGCTG ATGCGCAAGC TGCCTGGCAA CAAGAGCGAG
CCGGTGCCTT ACAACGAATA CCGCGCCTTG CGCTGGAGCC TGGGCGAGTT GCCTGCAGGC
GGTGTTGCTG CAGTCACGGC ACGCGCCAAG GTTGAAGCGG TGGTTCCCAC ACCACCCAAA
ACCGCGCCAG CTTCAGTCCC GTCTTCCGCC GTCACCGTGA AGCCTGCCAG CGCAGCCCGC
TGA
 
Protein sequence
MAQPTVAASK AAASAAAPAV VKAVSVELTQ FKVVKDAKGV EQLVAAPSVM PGDVIEYKVT 
YKNTSTKSVG GLVADLPIPE GLEYLPKSAK PGAALVKAAA KDGEYAAEPL MRKLPGNKSE
PVPYNEYRAL RWSLGELPAG GVAAVTARAK VEAVVPTPPK TAPASVPSSA VTVKPASAAR