| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0395 |
|---|
| Symbol | |
|---|
| ID | 4689013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 392221 |
|---|
| End bp | 393561 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639833388 |
|---|
| Product | L-sorbosone dehydrogenase |
|---|
| Protein accession | YP_980639 |
|---|
| Protein GI | 121603310 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.409913 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCAA GCGTTTTTCA TCCCCGCCGG TGGCGTGCTG CCTTGTACCT TGCGATGCTG
GGGGGCCTGG CAGCCTGCGG CGACACCGCA AAACTGCCGC CCACGGCCGG CATGGGCGCC
ACCCCGACCC TGCCGCCGCC CAGGAGCAGC CTGATCCCCA CGGTCAAGAT CGCACCGGCC
ACGGGCTGGC CCGAAGGATT GGCGCCCACG GCCATGGCGG GGCTGAACGT CAGCGCCCTG
GCCACCGGGC TGGAGCATCC GCGCTGGCTT TACGTGCTGC CCAACGGCGA CGTGCTGGTG
GCCGAAACCA ATGCGCCGCC CAAGCCCGAA GGCGGCAAGG GCATCAGGGG CTGGATCATG
AAAAAAGCGA TGGCCCAGGC CGGCGCCGGC GTGCCGTCGG CCAACCGCAT CACGCTGCTG
CGCGACCTGG ACGGCGACGG CAAGGCAGAA ACCCGCACGG TGTTTCTGCA GAACCTCAAT
TCGCCCTTTG GCATGGCGCT GGTGGGCGGC GATTTGTACA TTGCCAATGC CGATGCCCTG
GTCCGCGTCC CTTATCAGCC CGGGCAGACC CGCATCAGCG ACGTGCCGGT CAAGGTGGTC
GATCTGCCGG GCGGCCCGAT CAACCACCAC TGGACAAAAA ACGTCATCGC CAGCCCGGAC
GGCAGCAAGC TGTATGTCAG CGTCGGCTCG AACAGCAACG TGGCGGAAAA CGGCATCGAG
GCCGAAACCG GACGCGCCGC GATCTGGGAA GTGGATGTGA AAAGCGGAAG CCACCGGGTG
TTTGCCACCG GCCTGCGCAA CCCCAACGGC ATGGGCTGGG CGCCCGAAAC CGGCGCGCTC
TGGACGGTGG TGAACGAGCG CGATGAAATC GGCAGCGACC TGGTGCCCGA CTACCTCACG
TCGGTGAAGG ACGGCGGCTT CTACGGCTGG CCCTGGAGCT ACTACGGCCA GCACGTCGAT
GTGCGCGTCA AGCCGCAAAA GCCCGAGATG GTCGCCAGGG CGATTGCGCC CGATTACGCG
CTGGGCTCGC ATGTCGCGCC GCTGGGCATG GCTTTTTCCG AAGGCAATGC CTTGCCGGCG
TCCCTGGCCA GCGGGGTGTT TGTCGGCGAG CATGGCTCGT GGAACCGCAA GCCGCGCAGT
GGCTACAAGG TCGTGTTCGT GCCTTTCGCC AAGGGCCGGC CGGCGGGCCT GCCGATTGAT
GTGCTCACGG GTTTTGTGAA TGCCGAAGGC AAGGCCCATG GCCGCCCGGT CGGCGTGGCG
ATGGACAAGC GCGGCGCGCT GCTGGTGGCT GACGATGTCG GCAACGTGGT CTGGCGCGTG
GCCGGCACGG CGACCCGCTA G
|
|---|
| Protein sequence | MHSSVFHPRR WRAALYLAML GGLAACGDTA KLPPTAGMGA TPTLPPPRSS LIPTVKIAPA
TGWPEGLAPT AMAGLNVSAL ATGLEHPRWL YVLPNGDVLV AETNAPPKPE GGKGIRGWIM
KKAMAQAGAG VPSANRITLL RDLDGDGKAE TRTVFLQNLN SPFGMALVGG DLYIANADAL
VRVPYQPGQT RISDVPVKVV DLPGGPINHH WTKNVIASPD GSKLYVSVGS NSNVAENGIE
AETGRAAIWE VDVKSGSHRV FATGLRNPNG MGWAPETGAL WTVVNERDEI GSDLVPDYLT
SVKDGGFYGW PWSYYGQHVD VRVKPQKPEM VARAIAPDYA LGSHVAPLGM AFSEGNALPA
SLASGVFVGE HGSWNRKPRS GYKVVFVPFA KGRPAGLPID VLTGFVNAEG KAHGRPVGVA
MDKRGALLVA DDVGNVVWRV AGTATR
|
|---|
| |