Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0290 |
Symbol | |
ID | 4689779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 291076 |
End bp | 291633 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639833282 |
Product | hypothetical protein |
Protein accession | YP_980534 |
Protein GI | 121603205 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCC CGTTTTTTGG CAAGCGAGAC AATGAAATTC CAAGCTCCGG TGTACGCCCT GGCTCCGTCA ACAGCTACAC GGGCTCGGGC AGCAGCCCAT CGGCCACGCT GCACCCCGCG AGCCCCCAAG GCGTGGTCAA GCCGCTGGGC AGCGAGCCCG CCGCCTCTGC CGGACATGAA CGGGAAAGCG GCAGCAAGCT GACCGTCGGT CCCAACATCA AGCTCAAGGG CGTCGAGATC ACCGACTGCG ACACGCTGGT GGTCGAGGGC ACGGTGGAGG CCACCATGAG TTCGCGCGTC ATCCAGATAG CGGAGCAGGG CACTTTCAAG GGCTCGGCCG AAATCGAGAT TGCCGAAATC CGGGGCGAAT TCAACGGCAA CCTGACCGTT CGCCAAAAGC TGGTGATCTA CGCCACCGGC AAGGTCACGG GCACCATCCG CTACGGCAAG CTGGTGGTCG AAGAGGGCGG CCAGCTTTCG GGGGAAATCG TCTTCGGCAC GCAGGGCGCC AGCAGCAAGC CCGCCCTGAT GGCCAAGCCC GGCCTGCAGG CTGCGTGA
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Protein sequence | MATPFFGKRD NEIPSSGVRP GSVNSYTGSG SSPSATLHPA SPQGVVKPLG SEPAASAGHE RESGSKLTVG PNIKLKGVEI TDCDTLVVEG TVEATMSSRV IQIAEQGTFK GSAEIEIAEI RGEFNGNLTV RQKLVIYATG KVTGTIRYGK LVVEEGGQLS GEIVFGTQGA SSKPALMAKP GLQAA
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