Gene Pnap_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0290 
Symbol 
ID4689779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp291076 
End bp291633 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID639833282 
Producthypothetical protein 
Protein accessionYP_980534 
Protein GI121603205 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC CGTTTTTTGG CAAGCGAGAC AATGAAATTC CAAGCTCCGG TGTACGCCCT 
GGCTCCGTCA ACAGCTACAC GGGCTCGGGC AGCAGCCCAT CGGCCACGCT GCACCCCGCG
AGCCCCCAAG GCGTGGTCAA GCCGCTGGGC AGCGAGCCCG CCGCCTCTGC CGGACATGAA
CGGGAAAGCG GCAGCAAGCT GACCGTCGGT CCCAACATCA AGCTCAAGGG CGTCGAGATC
ACCGACTGCG ACACGCTGGT GGTCGAGGGC ACGGTGGAGG CCACCATGAG TTCGCGCGTC
ATCCAGATAG CGGAGCAGGG CACTTTCAAG GGCTCGGCCG AAATCGAGAT TGCCGAAATC
CGGGGCGAAT TCAACGGCAA CCTGACCGTT CGCCAAAAGC TGGTGATCTA CGCCACCGGC
AAGGTCACGG GCACCATCCG CTACGGCAAG CTGGTGGTCG AAGAGGGCGG CCAGCTTTCG
GGGGAAATCG TCTTCGGCAC GCAGGGCGCC AGCAGCAAGC CCGCCCTGAT GGCCAAGCCC
GGCCTGCAGG CTGCGTGA
 
Protein sequence
MATPFFGKRD NEIPSSGVRP GSVNSYTGSG SSPSATLHPA SPQGVVKPLG SEPAASAGHE 
RESGSKLTVG PNIKLKGVEI TDCDTLVVEG TVEATMSSRV IQIAEQGTFK GSAEIEIAEI
RGEFNGNLTV RQKLVIYATG KVTGTIRYGK LVVEEGGQLS GEIVFGTQGA SSKPALMAKP
GLQAA