Gene Pnap_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0272 
Symbol 
ID4687668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp272903 
End bp273502 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID639833266 
Productphosphoheptose isomerase 
Protein accessionYP_980518 
Protein GI121603189 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC AACGAATCGA ACAGCAATTC ATCGACAGCG CCGACCTCAA ATACCAGGCC 
GCGCAAGTCT TGTCCAAACC CATTGCCGCA GCGGTGCATG CCATTTTGGC CAGTGTCACC
AGCGGCAACA AGGTGCTGGC CTGCGGCAAT GGCGGCTCGG CCGCTGATGC CCAGCACTTC
GCCGCTGAAT TCGTGGGCCG CTACGAACGC GAGCGGCCCG AACTTGGCGC GATTGCCCTG
ACGACCGACA GCTCCATCAT CACGGCGATT GCCAATGATT ACGATTTCAG CGTGATTTTC
TCCAAACAGG TGCGCGCCCT GGGCGTGGCC GGCGACGTGC TGCTGGCCAT CAGCACCAGC
GGCAACTCGG CCAATGTGCT GGCCGCTGTC GAGGCGGCGC ATGAGCGCGA CATGACGGTG
GTGGCGCTGA CCGGCCGGGG CGGCGGCAAG ATGAACCAGG CCCTGCGCGA AACCGATGTG
CATATCTGCG TGCCGCATGA GCGCACGGCC CGCATTCAGG AAGTGCATTC CCTCGTCATC
CACTGCATTT GCGACGGCGT GGATACCCAG TTGCTTGGTG ATCAGGAGTC TTCGGCATGA
 
Protein sequence
MLEQRIEQQF IDSADLKYQA AQVLSKPIAA AVHAILASVT SGNKVLACGN GGSAADAQHF 
AAEFVGRYER ERPELGAIAL TTDSSIITAI ANDYDFSVIF SKQVRALGVA GDVLLAISTS
GNSANVLAAV EAAHERDMTV VALTGRGGGK MNQALRETDV HICVPHERTA RIQEVHSLVI
HCICDGVDTQ LLGDQESSA