Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0189 |
Symbol | |
ID | 4686914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 201305 |
End bp | 201871 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639833182 |
Product | hypothetical protein |
Protein accession | YP_980435 |
Protein GI | 121603106 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0838572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATTT TGTCCCGCAT CCATGCCGGC CCTGGCGCGA CCCAGGCCAG CGCCGATGAC CTGACACGGG ACAACGTGGA GTCGATGCGC CGGGTCGAGG AACAGGCCAT GGCCAAACGC AGCCGCGCCG ACCGCATCGC CGCTTTCGTG GCCAGCTTTT GCGGCTCCAT GCCCTTTGTC TGGCTGCATG TGCTGCTGTT TTTCGTCTGG CTGGCGCTGA ACTCGTGGCC GGGCATCCAT CATTTCGACC CCTACCCGTT CACTTTTCTG ACACTGGTTG TTTCGCTGGA GGCGATTTTC CTGTCGGCCT TCATTTTGAT CAGCCAGAAC TATGAACTGC GCATCAGCGA CCGGCGCAAC CAGCTGGACC TGCAGATCAA CCTGCTGACC GAGCAGGAAA ACACCAAGAT GCTCCAGTTG CTGGAGCAAA TTGCCGCGAA AGTGGGGGTT GACGTGAGCG GTGATGCCGA GCTGCGCTTT CTCAAGCAGG TCACCCACCC CGAAAAGCTG ATTGCCCAGA TCGAACACGC CCAGCAGGAA CGCCCGCTGA AGACGTCTTC GGTTTAA
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Protein sequence | MSILSRIHAG PGATQASADD LTRDNVESMR RVEEQAMAKR SRADRIAAFV ASFCGSMPFV WLHVLLFFVW LALNSWPGIH HFDPYPFTFL TLVVSLEAIF LSAFILISQN YELRISDRRN QLDLQINLLT EQENTKMLQL LEQIAAKVGV DVSGDAELRF LKQVTHPEKL IAQIEHAQQE RPLKTSSV
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