Gene Pnap_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0161 
Symbol 
ID4688049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp169633 
End bp170742 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content68% 
IMG OID639833154 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_980407 
Protein GI121603078 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACC AACTGCTTTC CCCCCTGAAG ATCGGCCAGA CCACCTTGGC CAACCGCGTC 
GTCATGGCGC CGCTGACCCG CTCGCGGGCC GGCCAGCCGG GCGATGTGCC GAATGCCCTC
AATACCGAGT ACTACACCCA GCGCGCCAGC GCCGGCCTGA TCGTCACCGA AGCCACGCAG
ATTTCCCGCC AGGGCCAGGG CTACGCGCTG ACGCCCGGCA TCTACACCGA CGCGCAGGAA
GCCGGCTGGA AACAGGTGGT GCAGGCGGTG CACGCCCAGG ACGGCCATAT CGCGCTGCAG
CTCTGGCATG TCGGCCGCAT CTCGCATTCA CTGCTGCAGG AAAACGGCGC GGCGCCGGTG
GCCCCTTCGG CGCTGGTTGC CAAAGGCGCC CAGTGCTTCG TGATCCAGCC CGACGGCACG
CCCGCCAACG TGCCCACCGA AACCCCGCGC GCGCTGGCGA CTGAAGAGCT GCCCGGCATC
GTGGAGCAAT ACCGCCAGGC GGCCGTGCGC GGCAAGCAGG CCGGCTTTGA CTTCCTGGAG
CTGCATGCGG CCAACGGCTA TTTGCTGCAC CAGTTCCTGT CCACCAACAG CAACCAGCGC
CTTGACGGCT ACGGCGGCAG CCTGGAAAAC CGCGCCCGCC TGACGCTCGA AGCGCTGGAC
GCGCTGATCG GCGAGGTCGG TGCCGCGCAG GTCGGCGTGC GCCTGTCGCC GCATTTCGCC
GGGCACGACA TGGCCGATGC CGAAGCCGAA GCCAGCGCCC TGTACCTGGC CCGGGCCTTC
AGCGAGCGCG GCATTGCCTA CCTGCACATC GCCGAACCCG ACTGGGCCGG CGGCCCGGAA
CTGAGCGATG CCTTCCGCGC GCAGCTGCGC ATGGCGTTCA ACGGTGCCCT GATCTTTTGC
GGCAACTACA CGGCGGCCGA TGCGCAGGCG CTGATTGCGC AGGGCATCGC CGACGCCGTG
GCGTTTGGCC GGCCGTTCAT CGCCAATGCC GACCTGGTGG AGCGTTTCCG CCAGGGCGCC
GAACTCAATA CCCCGGACCG GACGACGTTT TACGGTGGCG GTGCGCACGG CTACACCGAT
TACCCGACAC TGGCATTGCA GCCGGCGTAA
 
Protein sequence
MLNQLLSPLK IGQTTLANRV VMAPLTRSRA GQPGDVPNAL NTEYYTQRAS AGLIVTEATQ 
ISRQGQGYAL TPGIYTDAQE AGWKQVVQAV HAQDGHIALQ LWHVGRISHS LLQENGAAPV
APSALVAKGA QCFVIQPDGT PANVPTETPR ALATEELPGI VEQYRQAAVR GKQAGFDFLE
LHAANGYLLH QFLSTNSNQR LDGYGGSLEN RARLTLEALD ALIGEVGAAQ VGVRLSPHFA
GHDMADAEAE ASALYLARAF SERGIAYLHI AEPDWAGGPE LSDAFRAQLR MAFNGALIFC
GNYTAADAQA LIAQGIADAV AFGRPFIANA DLVERFRQGA ELNTPDRTTF YGGGAHGYTD
YPTLALQPA