| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0136 |
|---|
| Symbol | |
|---|
| ID | 4688468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 147617 |
|---|
| End bp | 148684 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639833129 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_980382 |
|---|
| Protein GI | 121603053 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACG CCGCCCTGGC CAGCCCGCCG GCAGTTTGGC ACTTTCCTGT TTGTCCGCCC
ACCCTTCCCG AGGAAATCAC CATGAGTCTT TCACGTCGCC ACCTCATCCA GTCCACGGGC
GCTGCGGCGC TGCTGGCCGG CATCGGCCGG CAGGCTTGGG CGCAGGCCAT CGACAGCGCC
CGGGTCGTCG CCGGTTTTGC CCCGGGCGGC ACGGCCGACA TCGTCTCGCG CCGCGTGGCC
GACAAGCTGC ACCCGACTTA TGCCAGGAGC GCGGTGGTTG AAAACAAGAC CGGCGCCGGC
GGCCAGATCG CCGTGCAGTT TGTCAAGACC GCCGCGCCCG ACGGTAGCGT GATGCTGCTC
ACGCCCATGT CGATGCTGGG CATTTACCCC CACACCTACA AGAAGCTGCC GTATGACCCG
GTGGCCGACC TGACGCCGGT CTCGGCGGCG GCGATTTTTG ACTACGGCTT TGCGGTCGGC
CCCATGGTGC CGGCCAGCGT CAAAAACGTG CCGGACTTTC TGGCCTGGTG CAAGGCCACC
CCGATGCAGG CCAATTTCGG CTCGCCCGCC GCCGGCTCGT CGCCGCACTT CATCGGCGCG
CTGCTGGGCC GTGCCGGCAA TGTCGATTTG CGCCACGTGG CCTTTCGCGG CACGCAGCCG
GCGGTGCTGG ACATGGTAGG CGGGCAGATT GCCGCCGTGT CTGGCCCCAC CGGCGAGTTC
ACGCAGCATG TGGCCGCAGG CAAATGCCGC CTGCTGTCCA CCAGCGGCCC CAGGCGCGGC
AAGTTCACGC CCGGCACACC AACGCTGGTC GAGCAGGGCT TCAAGGATCT GGCCTTCACC
GAATGGTTTG GCTTTTTCCT GCCCGCCAGG GCGCCGCAGG AGGTGGTGCA GCGCCTGAAT
GCCGCCATCC GCTCGGCGCT GGCGTCGCAG GAGGTGGCTG ACGGCCTGGC CGTGTCTTAC
CTCGAAGTCC TGCCGACCTC GCCGGCCCAG CTGGCCGCCA TGCTCAAGGC CGACACCGAA
CGCTGGGGGC CGCTGGTCAA GGCGGTTGGC TTTACCCCCG AAGGCTAG
|
|---|
| Protein sequence | MINAALASPP AVWHFPVCPP TLPEEITMSL SRRHLIQSTG AAALLAGIGR QAWAQAIDSA
RVVAGFAPGG TADIVSRRVA DKLHPTYARS AVVENKTGAG GQIAVQFVKT AAPDGSVMLL
TPMSMLGIYP HTYKKLPYDP VADLTPVSAA AIFDYGFAVG PMVPASVKNV PDFLAWCKAT
PMQANFGSPA AGSSPHFIGA LLGRAGNVDL RHVAFRGTQP AVLDMVGGQI AAVSGPTGEF
TQHVAAGKCR LLSTSGPRRG KFTPGTPTLV EQGFKDLAFT EWFGFFLPAR APQEVVQRLN
AAIRSALASQ EVADGLAVSY LEVLPTSPAQ LAAMLKADTE RWGPLVKAVG FTPEG
|
|---|
| |