| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1600 |
|---|
| Symbol | |
|---|
| ID | 5756695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1743703 |
|---|
| End bp | 1744731 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641302789 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001568617 |
|---|
| Protein GI | 160903036 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGG GTCTAACTGT TTTGTTGTTA GTTACTGTTT TATTGAGTTT TTCGTTGATA
GGTTTTGGAC AAACTAGCTT TTTTGATATT TCAAAGGCAA ATCCACCTAA AGCTATTCAG
TCAAGTGACA TGACAATCTT CTTCATAGTA AAAGCTAGTG AGAATGAATT TTGGCAGATT
GTTTTGGATG GAGCGCAAAA AGCGGCGAAC CATTTTGGTG TAGAATTTAT TCATCAAGAA
GCCACTTCGG AGTCTGAAGT CTCAAGGCAA GTTTCTATTT TAGAAACAGC GATTTCTACA
AATCCAGATG CTATTGTTTT GGCTCCTACT GTAGCAGATG CCTTAGTCCC TGGAATAGAA
AGAGCTATGG ATAGTGGAAT CCCGGTAATA ATTATCGATT CCATGGCTAA CACGGATAAC
TATGTATCAT TTTTAGGTTC AGATAACTAC ACTATTGGCC AAAGATCCGC AGATGAGTTA
GCTAAGGCAC TGGAAGAGAA AAACGGTTCT CCAAGCGGAA AGGTTGCAGC AATAACATAT
ATGAGTGGAG TTGGATCATT AGAAGCTAGA ATCTCAGGAT TCTTGGATAG AATTGAAGAG
GCATATCCTG ATATTGAGGT AGTCAGTGTA AGAGATGCTA TGGGGCAAGT CGGTAACACC
ATAAACATTA CTTTAGATTT GCTGACTGCT TATCCTGATT TGGATGGTTT GTATGCTAAT
AATCAAATGA CAGGAGATGA CATGGTAAGA GCTCTTGATA TGCAAGGAAG AAACGATTTA
GCAGCTGTTG CAGTGGATGC CAGTGCCCAA GAGATTTGGG GGTTAGAAAA TGGTTATTTA
GACTCCGTTC TTGTTCAACA ACCATGGGTT ATGGGATACG CTGGAGTCGC CTACGCTGTT
ATGGCAAGAA ATGGAGTGCC TCTTGCTAAA AATGTCGATA CTGGAATATT AGTTATTACG
CCGGAATCAT TAGCAAGTGG AGAAGCAGAT GCTGCTATAA ATCCTTTTGA ATATTACAAG
GATTGGTAA
|
|---|
| Protein sequence | MKKGLTVLLL VTVLLSFSLI GFGQTSFFDI SKANPPKAIQ SSDMTIFFIV KASENEFWQI
VLDGAQKAAN HFGVEFIHQE ATSESEVSRQ VSILETAIST NPDAIVLAPT VADALVPGIE
RAMDSGIPVI IIDSMANTDN YVSFLGSDNY TIGQRSADEL AKALEEKNGS PSGKVAAITY
MSGVGSLEAR ISGFLDRIEE AYPDIEVVSV RDAMGQVGNT INITLDLLTA YPDLDGLYAN
NQMTGDDMVR ALDMQGRNDL AAVAVDASAQ EIWGLENGYL DSVLVQQPWV MGYAGVAYAV
MARNGVPLAK NVDTGILVIT PESLASGEAD AAINPFEYYK DW
|
|---|
| |