| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1450 |
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| Symbol | |
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| ID | 5757339 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | - |
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| Start bp | 1562661 |
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| End bp | 1564075 |
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| Gene Length | 1415 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641302644 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001568476 |
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| Protein GI | 160902895 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.107409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAAG AAAAGACAAT GCTAGTTAGT AAAGCTCTAG AAGAGATCAG AATAGCAATA
TTGGAAGAAG ATAAATTAAG TGAAATTTTT TTCGAGGATT TTGAAACCGA TAGAAATATT
GGGAAAATCT TTCTGGGTAT AATTGAAAAT AGGGTTCCGA GTTTGGAGGC TTTTTTTGTT
AATATTGGAT TAGGAAAGAA CGGTTTTCTC AGATACAGAG ACGTTCTTGA TGATCCCAAT
CAATATAAAG TTGGAGATAA GATTCTAGTT CAGGTAAGGA AAGACGGTGG AACGAGAAAA
GGCCCTCAAC TTTCTATGCA AATAAGTTTG CCTGGGAAAT ATTTAGTATA CATTCCAAAT
TCTAATGAAA GTATTGGGAT ATCTAGAAAA ATTCTCCAAG AAAAAGAAAG AATAAGATTG
AGGCAAGTTG CAAAAAAAAT TCTAATTGAT AACGAATCTA TAATATTTAG AACTAATTCT
GAAGGAATCG ATGAAAAAGA AGTAGAAGTA GAATTAAGCG AAATGCGCAA AATGTATAAC
AGTATTTTAC AAAGATTTCA TTCTCAAAAA AATCCTGGAG TTTTATACGA AGAAAGTGAT
TTTCTTGAGT ATATATTAAG GGAAAGATTG GATTCTAAAA CAAAAAAAAT AATCACAGAT
GACAGACAAA TTTTTAGAAA ACTAAAAAAA GTTTGAAAGG TTTCGAACTA AAACCCAAAG
TTGAGTTTGT AAGAGGAGAT GTTTTTCAGA TCCACAATAT ATACCATCAA ATGGAAGAGA
TCTTTACAAA GAAGATAGAA TTATCTGGTG GAGGAACAAT TACGGTAGAT AGAACGGAAG
CTTTAACAGC CATCGATGTA GATTCTGCTG GAAATTTAGA GGGGAAGAAT ATTGAAGAAA
CTTCTTTTAT TACAAATATG GAAGCAGCCA AAGAAATAGC TAGGCAATTG AAATTAAGGA
ATATTGGCGG TATGATCGTA GTTGATTTTA TTGATATGAA GGACTCTTCA CACAAAAAAA
CGATTATCAA TATTCTAAAA GAAGAATCAA AAAAAGATAA ATCAAAGGTT ACCATATTGG
GATTCACAAA CATGGGGTTG TTAGAAATTA TTAGGAAAAG AACCACACAA CCTCTGGATA
CCAATGTGTA TTCACAATGC CCATTGTGTC ATGGAACGGG AAAAATCATA GCCCCTTCTC
TTGTGCATGG AAGATTGATA AAAGAATTAT TGTCCTCCGC AAAGGAAATA AAAAAAGAAA
AAATAAAAGT AATTGAAATC AACGCATTTC ACAACCTTTC GGGATATTTA ACCCCAGCTT
TGACTGAAGA ACTGGAAAAA CAGTTAAACG TAAAATTAGA AGTTTCTTTT AACTGGCTAA
ATCCCAATTC TTACAATATT AAATACAAAA AATAA
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| Protein sequence | MDEEKTMLVS KALEEIRIAI LEEDKLSEIF FEDFETDRNI GKIFLGIIEN RVPSLEAFFV
NIGLGKNGFL RYRDVLDDPN QYKVGDKILV QVRKDGGTRK GPQLSMQISL PGKYLVYIPN
SNESIGISRK ILQEKERIRL RQVAKKILID NESIIFRTNS EGIDEKEVEV ELSEMRKMYN
SILQRFHSQK NPGVLYEESD FLEYILRERL DSKTKKIITD DRQIFRKLKK SLKGFELKPK
VEFVRGDVFQ IHNIYHQMEE IFTKKIELSG GGTITVDRTE ALTAIDVDSA GNLEGKNIEE
TSFITNMEAA KEIARQLKLR NIGGMIVVDF IDMKDSSHKK TIINILKEES KKDKSKVTIL
GFTNMGLLEI IRKRTTQPLD TNVYSQCPLC HGTGKIIAPS LVHGRLIKEL LSSAKEIKKE
KIKVIEINAF HNLSGYLTPA LTEELEKQLN VKLEVSFNWL NPNSYNIKYK K
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