| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1283 |
|---|
| Symbol | |
|---|
| ID | 5757360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1372693 |
|---|
| End bp | 1373745 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641302485 |
|---|
| Product | polysaccharide biosynthesis protein CapD |
|---|
| Protein accession | YP_001568319 |
|---|
| Protein GI | 160902738 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGG ATAAAACTCT ATTAGTTACA GGAGGAACAG GGACTTTTGG TAACGCAGTA
GTTAGAAGGT TTTTGAATAC AGATATTAAA GAAATCCGTA TCTTTTCTCG TGATGAGAAA
AAGCAAGACG ATATGAGAAG ATTCTATAAA AACGATAAAT TAAAGTTTTT CATAGGCGAT
GTACGTGACA TTCAAAGCGT TCGAAACGCC ATGTATGGGG TAGATTACGT CTTTCAAGCT
GCCGCATTGA AACAAGTGCC TTCATGTGAG TTCTTCCCAT TGGAAGCTGT TAAAACGAAT
ATCTTAGGAA CAGAAAATGT GCTAACAGCT GCCATTGAAT TTGGTGTTAA AAAAGTAGTT
TGTTTATCAA CGGATAAAGC GGTTTATCCA ATAAACGCAA TGGGGATGTC TAAAGCTCTC
ATGGAGAAGA TATTCGTTGC AAAGTCTCGA ACTGTCGAAC CAGATAAGAC ATTAATTTGT
GGCACAAGAT ATGGAAACGT TATGGCTTCC CGAGGTTCAG TTATCCCACT GTTTGTGCAA
CAAATTAAAA ATGGCAAACC CCTTACAGTA ACGAATCCTG ACATGACGAG ATTTTTAATG
AGCATAGAAG AAGCTGTTGA TCTGGTTTTA TACGCTTTTC AAAACGGTAA TCAAGGAGAT
AGATTTGTTA AAAAATCACC TTCCGCAAAA ATAGGAGACT TAGCCCAAGC AATGAAAGAG
ATCTTTGAAG TGGAAAACGA AATAAAAATA ATTGGCACAC GTCATGGAGA AAAGATGCAT
GAAACACTTC TTACAAAGGA AGAACATCTT GTTTCTGAGG ATTTAGGAGA TTTCTACAGA
ATTCCAGCGG ACACAAGAGA TTTAAATTAC GAAAAATACT TTGAAAAAGG GACATCTGAT
TTATCAAAGT ATGTTGATTA TAGGTCTGAT AACACAATTA TTCTAAGCGT TGAACAAACA
AAAGAGAAGC TTCTTTCTTT AGATTATATA CAAAAGGAAC TAGAAGACTA CAAAAATGGC
GGAACTAAGC CAATAGTGAG TGAAGGGTTT TAG
|
|---|
| Protein sequence | MLKDKTLLVT GGTGTFGNAV VRRFLNTDIK EIRIFSRDEK KQDDMRRFYK NDKLKFFIGD
VRDIQSVRNA MYGVDYVFQA AALKQVPSCE FFPLEAVKTN ILGTENVLTA AIEFGVKKVV
CLSTDKAVYP INAMGMSKAL MEKIFVAKSR TVEPDKTLIC GTRYGNVMAS RGSVIPLFVQ
QIKNGKPLTV TNPDMTRFLM SIEEAVDLVL YAFQNGNQGD RFVKKSPSAK IGDLAQAMKE
IFEVENEIKI IGTRHGEKMH ETLLTKEEHL VSEDLGDFYR IPADTRDLNY EKYFEKGTSD
LSKYVDYRSD NTIILSVEQT KEKLLSLDYI QKELEDYKNG GTKPIVSEGF
|
|---|
| |