Gene Pmob_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1228 
Symbol 
ID5758112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1311812 
End bp1314073 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content37% 
IMG OID641302432 
Productsurface antigen (D15) 
Protein accessionYP_001568267 
Protein GI160902686 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ATTTTCTACT ATTTACCGTC TTTCTCATCG CAGGATTCGC ATTTTCAATA 
ACCCTTTTAA ACGACATTTC CTACAATGTT GACATATCTT ATGCAGCAAC GGATGTGGAA
AGGGTGTTAA CAAATTATGG TATACAAGAA GGCTCCTATG TAGGAGATAT AGACATTAGA
TTGGCTATAC AAGAAATATT AAAATCAGGT TATTTTACCT CTGTATCTTA CAATTTGGAC
GAAAATGGGA ATCTGGAATT CATATTTAAG CCCAACCCTA TTGTAACAAA TTACGAAGTT
GAGATCTTAG GTGATGAATT GATCAACAAA GAAAATATTC GTTCTTCGAT CAGTTTAAAT
ACCAATGTCC CTTTGAGTCT AAATGATTTT CAAACCTCGA TGAAAAATAT ACAAGATTTG
TACATAAAAA ACGGTTACCA ATTCGTTGAT ATATACTCTA ATCTAAAAAT GTCTGGAGAT
GAGATCACCT TAGAGGCAAC TGAGATAAAC AATAAAGAAT ATTCATCAGA TACCTTGGTT
TTCATCGTTA AAGAGTATTC TCTTTGGGAT TTAGAATTAA GGGGAGAATT ATCTCAACTG
GATAAAGAAA ACATAAAGGA AAGAATCGGT TTTGATTTTA GAAAAGATTG GAATAGCAAG
TTCTTCTTGT TTAGACCCAA CGCCAAAGAA ACCTACCCAA GTTTTCAAAA GGTTCAGATC
ATATTGAACT CGTTAAATCA AATTCCGTTT TTCTCCGCTG ACACGAATTT ACGTTTCGAA
GTAACCGAAA TAGAAGAAAA TAAAGGTGGA GAGTTATTAC TGGTTTTAGA AGGCAGCTTA
AGAAAAATTA TTCCCCAAGA GCCAGTAGTA ATAAACAAAA TATCTTTTGT CGGAAACGAA
AGTTTAGAAG ACTTCAGATT GAATGAGGTT GTGAATGAGT TTGTTCCATT AGGAAACCCT
GTGAGTAACT TAGACGTTCT TTACGCTTAC GATAACCTCC AAAAGGCTTA TTACGACAAT
GGATATATTT ACACGTTAAT TATCCCTAAA TACCAAGATG AGGCATTAAT TTTCGAAATA
ACGGAACCTA AGGTTGGAGA GGTTGAAATA ACTCAAGAGG CAACCGCTAA AACCCAACCG
TACATAGTTG AGTCCTTAGT GAAGATAAAA CCAGGCGAGG TTGTCAACCA GCAAAAATTA
CAAGATACCT ACACATCCTT CATGGGAACA GGATTTTTTC AAGATGTTAT GATACAACCT
ATTCAGCAAG CCGAAGATGT GATAGGCTTT AGGATAACCC CCATAGAAAG CGAAAAACTC
GGAAAATTAA TGGGTGGTGT CACCTGGAGC TTACCAGAAG AAGGTCAAGA ATGGTATCAA
GGTTTTACTG GTCAGCTTGA GGTTCAGTGG TTAAATCCTT TTGGATACGG ACAAACATTT
TCTCTCAACT CAGATTTGAA TCCTTTGGGG AATTACTATT CTTTTGGGTT CGATTACGAT
GTTATTAAGT TGGCTGGTAG TGATCTTGAT TTAGGCGCCG GCATACATTA TACGGTAAGC
GGTGATGGAG AGTATTATTC GAACATCGGA GAAGATGCGA CGAACTATCT GTCCTTATCT
GTTGCTCCAA GATACAGTAT ACAAGACTTC TCTTATATAA CAAGTTCCTT TACCTACAAT
AACTACAAAT TATTGGATGA AAGTAATCTT AATCTACTTT CTGGTTCAAT CGGGTATCTA
TACAATAGCT TAGACAGCCC TTATAGGCCT TATAATGGTC AATATTTCCA AATAAACGGT
ATCGGTGGGG TTGAAACAAG CAATGCCAAT TACTATGTTG GTGCCAACAC TGAAGGTAAA
CTGTTTTACA GTTTCTATAA ATTCACATTG GGAAGTAGAC TGAAACTGGG TACCGTCTAT
AATTCTAACA TCGATTCTAA CCTGCATTAT CAGTACAATG TAGGAGGGAT GTACTCTGTA
AGGACTTCTG ATTTTTACGA ACAAGAAGGA GAAAATTTAC TTTTATTCAA CACAGAATTG
GCTTACGAGC TTGCCACGGG TCAAGTCCCA TTGGATCTCA TTGCCTATTT TGATTACGGT
AGCGCTCAAG ATGACATCAG TAACCTTATT GGTGGTGGTA TCTTGTCTTT TGGTGGCGGA
TTAAGATTCA CAGTTCCTTT ATTGGGTCAA ATTGGCTTTG GATATGGATG GGATGAGGCT
TTACAAGGAC AGGTCTGGTT CGGTTTTGGT CAGACATTTT AA
 
Protein sequence
MKKHFLLFTV FLIAGFAFSI TLLNDISYNV DISYAATDVE RVLTNYGIQE GSYVGDIDIR 
LAIQEILKSG YFTSVSYNLD ENGNLEFIFK PNPIVTNYEV EILGDELINK ENIRSSISLN
TNVPLSLNDF QTSMKNIQDL YIKNGYQFVD IYSNLKMSGD EITLEATEIN NKEYSSDTLV
FIVKEYSLWD LELRGELSQL DKENIKERIG FDFRKDWNSK FFLFRPNAKE TYPSFQKVQI
ILNSLNQIPF FSADTNLRFE VTEIEENKGG ELLLVLEGSL RKIIPQEPVV INKISFVGNE
SLEDFRLNEV VNEFVPLGNP VSNLDVLYAY DNLQKAYYDN GYIYTLIIPK YQDEALIFEI
TEPKVGEVEI TQEATAKTQP YIVESLVKIK PGEVVNQQKL QDTYTSFMGT GFFQDVMIQP
IQQAEDVIGF RITPIESEKL GKLMGGVTWS LPEEGQEWYQ GFTGQLEVQW LNPFGYGQTF
SLNSDLNPLG NYYSFGFDYD VIKLAGSDLD LGAGIHYTVS GDGEYYSNIG EDATNYLSLS
VAPRYSIQDF SYITSSFTYN NYKLLDESNL NLLSGSIGYL YNSLDSPYRP YNGQYFQING
IGGVETSNAN YYVGANTEGK LFYSFYKFTL GSRLKLGTVY NSNIDSNLHY QYNVGGMYSV
RTSDFYEQEG ENLLLFNTEL AYELATGQVP LDLIAYFDYG SAQDDISNLI GGGILSFGGG
LRFTVPLLGQ IGFGYGWDEA LQGQVWFGFG QTF