Gene Pmob_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0980 
Symbol 
ID5757446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1041986 
End bp1042756 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content37% 
IMG OID641302189 
Product5-carboxymethyl-2-hydroxymuconate Delta-isomerase 
Protein accessionYP_001568025 
Protein GI160902444 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCG TCAGATTTCA AAAAGATGGA AAAATAAGTT ACGGCGTTTT GGAAGAAAAC 
ATTATAAAAG TTATTAACGG CGATATCTTT GACGAATTCA CAGTTACCGA TAATATCTAT
CCGTTCACTG AGGTTACGTT AAAGGCTCCT TGTAATCCTA GCAAGATCGT TTGCGTTGGC
TTAAACTATC GAGATCATGC GGCAGAAATG AAGGATAGAA TTCCAGAAGA ACCGGTTCTC
TTCATAAAGC CGTCAACGGC TGTGATTGGG CCAAAAGAAA GTATTATATA CCCAAAAATG
AGCAATCAAG TAGATTATGA GGCAGAACTG GCAGTTGTAA TTAAAGACAA AATCAAAGAC
ATAGAAGAAG ACCAAGTAAA AGAACATATC TTAGGATATA CTTGCTTTAA CGATGTTACC
GCCAGGGATT TACAGAAGAA AGATGGACAA TGGACACGAG CAAAATCCTT TGATACTTTT
GCGCCCTTTG GTCCCACAAT TGTAACAGAT ATTGATCCAA GTAACCTAAA TATTCAACTT
TTACTCAACG ATCAAATCAA GCAAAACTCA AATACTAACC AATTAATCTT TTCTATGGAA
AAACTCGTAA GTTTCATATC AAAAATAATG ACCTTGAATC CTGGTGATGT AATTGCCACA
GGTACACCTT CAGGGGTGGG ACCAATGAAT GTTGGAGATA AGGTGGCAGT TAAAATAGAG
AAAATAGGGA TACTAGAAAA TTATGTTAGA AACTATGCAT CTAGGCTCTG A
 
Protein sequence
MKLVRFQKDG KISYGVLEEN IIKVINGDIF DEFTVTDNIY PFTEVTLKAP CNPSKIVCVG 
LNYRDHAAEM KDRIPEEPVL FIKPSTAVIG PKESIIYPKM SNQVDYEAEL AVVIKDKIKD
IEEDQVKEHI LGYTCFNDVT ARDLQKKDGQ WTRAKSFDTF APFGPTIVTD IDPSNLNIQL
LLNDQIKQNS NTNQLIFSME KLVSFISKIM TLNPGDVIAT GTPSGVGPMN VGDKVAVKIE
KIGILENYVR NYASRL