Gene Pmob_0945 details

Gene Information

• Locus tag: Pmob_0945
• ID: 5757544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Petrotoga mobilis SJ95
• Kingdom: Bacteria
• Replicon accession: NC_010003
• Strand: -
• Start bp: 999691
• End bp: 1001568
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 641302153
• Product: lipopolysaccharide biosynthesis protein
• Protein accession: YP_001567990
• Protein GI: 160902409
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAG AAAAGGAACT AACCTTTTCA GACATACTCA GAATTTTTAA AAGAAGGAAA 
TGGACCTTTT TAATTATTTT CTTTTTAACC ATCTTTTTAA CAGGGATTTA TCTATTTTTC 
ATCGCAACTC CCAAGTATGA AGCGAAACAA GTTATAGAGT ACAAATCAAG TTCTTCCCAA 
CCAACGGTCT CTTTAGGGTC TATGTCTTCT GCCGCAAACT TGTTAGGAAT CAGCCAACCT 
TCTGACTCTG GTTTAACCAC TGAAATTGAA AGGATGAAAG CCGATTGGGT GTTGGCAAAC 
GTTGTAAAAG AGCTCAATCT TGTAGAAAAA GCAAATGAGA ACAAAGGGTT AATTGCCCGA 
TTAAGAGGCA CAGAAATAAC AGAAAGATAT CTCATTGATT CACTAAAAGA AGATATAAAT 
ATACAAAATG TGGAAGAAAC TAATATGATA GAAATAAGCT ACCAAAGTTC TGATCCAACT 
ATTGCTGCTT CGGTTGTCTC ACTTGTGTAT TCTTACTACA CCGATTATGC GAAAAACCTT 
TATTTTGAGG ATTCTCAATC TTATTTGAAT CAAGTCGAAA CTTTATTTGA AGATGTTTCT 
CATCAATATG ATCAGATTAA TAAAGAGGTT TTGGATTTCC AAACCAAAAA TAAACTACAG 
GGGACTACTT TAGATCCTTC ATCAGAGAGC ACTCAAGGTG TGGATCCCTT AATTAATTAC 
TACTCAGAAA CCTATATGAA TATACTCAAA TTAGAAGCAG ACAAAAACCA ATTAGAAATC 
AGAAAGCAGG CTATTGAAGA TAATATTTTC AAAATGAGTC CAGAAACTAA AGAGTTTATA 
CTAACAAACA CAGAAAAAGA CACACCTGTT AAGGATATAA AATCCAAATT AGTAAGCGAT 
AGAATAGAAT TAGAAACTTT AAAATTAAAT TCTCCTAGTT CTCCAAGAAT CGGTGCTTTG 
GAAGCCGAAA TATCCGTTTT AGAAAATGAA TTGGAAAATA ACCTTGAAGC GATTTTTTCC 
AACGATCTAA ACTTTCTTGC ATCGATCGAT ATGGCAACTT TTAATGAGTA TACGGGGATA 
ATTACACAAC TACAACTTTT CGATGTAACA AAACAAGTGT ACGAAAATAT GCTCCAACTT 
ATAGATGATG AAATTGCGAA AAGATCCCCT ATTATGTACG AATACTTCCT TTTGAGAAAA 
GATCAAGCTA TACTTCAAAC AAGGTACAAC ACTTTACTAA CGGTTCTAGA GCAAGAAAGG 
ATGAAAGCAT CACTGTACGA TAACAAATTT ACAGTAATAA CCTCCGCTTA CATACCAGAA 
AATCCTGTAG CACCAAATAC TACCCTCATT TTAGTTATTG GAGTAGGGGT AGCTATAGCC 
TTGGGGATTT TGAGTGTTTT CGTAAGAGAA GTAAACGACA AAACGGTGAA AGATCTATAC 
GAATTTGAAA GTTTATTTGG AGTTCCTGAC ATCATTTTAG ATGACTCAAA CGATGCAGAA 
AAAATAGTCA ATTATGTTTA TAAAAAAGAT TTTAAAAAGT TTGGGTTGTT GTTTTTGGGA 
AATTTCTCAG TTGCCCAGAA CCTTTCCCAA AGAATTTACA ACATCTTAAA TACCATAAAA 
CCTTATAAAA CGGAGTATTT CACTTCGATA GAAAACGAAG ATTACAAAGA AAAGTTTGAA 
AAATTTGAAA AGTTTAAAAA CACTAATGAG GCTTTTATTA TGTTTGACAA TTTCAACAAC 
AGTGATTATA TACTATACAG AGATGATTTA GAAAAAATTA TTATATTTAT AGAAGAAAAA 
ACAACCAATT TGGAAGATAT AATGGAGATT TTAGAAAAAG AAAAGGATCC CACCGTTGTT 
TATGTGAAAA AATATTAA 

 

Protein sequence

MEEEKELTFS DILRIFKRRK WTFLIIFFLT IFLTGIYLFF IATPKYEAKQ VIEYKSSSSQ 
PTVSLGSMSS AANLLGISQP SDSGLTTEIE RMKADWVLAN VVKELNLVEK ANENKGLIAR 
LRGTEITERY LIDSLKEDIN IQNVEETNMI EISYQSSDPT IAASVVSLVY SYYTDYAKNL 
YFEDSQSYLN QVETLFEDVS HQYDQINKEV LDFQTKNKLQ GTTLDPSSES TQGVDPLINY 
YSETYMNILK LEADKNQLEI RKQAIEDNIF KMSPETKEFI LTNTEKDTPV KDIKSKLVSD 
RIELETLKLN SPSSPRIGAL EAEISVLENE LENNLEAIFS NDLNFLASID MATFNEYTGI 
ITQLQLFDVT KQVYENMLQL IDDEIAKRSP IMYEYFLLRK DQAILQTRYN TLLTVLEQER 
MKASLYDNKF TVITSAYIPE NPVAPNTTLI LVIGVGVAIA LGILSVFVRE VNDKTVKDLY 
EFESLFGVPD IILDDSNDAE KIVNYVYKKD FKKFGLLFLG NFSVAQNLSQ RIYNILNTIK 
PYKTEYFTSI ENEDYKEKFE KFEKFKNTNE AFIMFDNFNN SDYILYRDDL EKIIIFIEEK 
TTNLEDIMEI LEKEKDPTVV YVKKY