Gene Pmob_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0929 
Symbol 
ID5757358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp983200 
End bp984480 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content33% 
IMG OID641302138 
Productexopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 
Protein accessionYP_001567975 
Protein GI160902394 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.509222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG CAGCGATCCA CTTATTAGAT ATATCGCTCA TATTCATTAT GAACACCTTC 
CTATTGAACC TACCAATAAC AATCTCATCA ATCACATCTC TAATAATATA CCTCGGGATA
TACTCCTTCA GAACATACGA CACCGAAACG ATGAAAAGTT ACACAGAATC TCTAATAAAA
ACCACCGTTG GAACTCTTGT GAGTTTCATC GTTATACTAA TTATCTACTT CTTTCTCGGT
AAGTACTTCA ACAGATACTT TTTCCTTTCT AACTTATTGT ACACAATAAC CCTCTTGCCA
ATAATACACA AAATAGAATA CAATATCTAC AAAAAATATA TGCCTGTAAA AAACTACCTC
GTAATAGGCA GAAAAGAAGA AATAGGCAAC ATAATGGAAG AAATCTCAGA AAAATCGCTC
AACAAAATAA AGTTCACACA ATACATAAAC CCAAATCCAG TAACACTCGA TGAAATAATA
AAACAAAACA CACAAAAAAC ATTAACCCAA ACGCTACATG GCATAGTAAT AACAGACCCA
GAATTAGAAG AAAGGGTAAA ACCACAGATA CAAAACTACA AAGCAGAAGG TTTAGAGATT
CAATACTTAC CGAACATGGT AGAAAAATAC CTAAAACGCA TACCAATAGA AGTTGCTCAA
AGTTTCAAAG AATATTACGA GATAGTGTTT CAAAACGTTC AACCATCTCC ATCACAAAAG
ATAATTGACA AGTTCTTTGG AACATTACTT TTAATACTAT TCTCTCCATT TATGTTAATA
ATAAGCTTGG CTATACTGAT TGAAGATGGC AAACCCATTA TTTACAAACA AAAAAGAATG
GGAAAAGACG AACAAATATT CATTATCAAC AAATTTAGAT CCTTGAAAGA GGCGGAAATA
GACCCAAATG ACCCAAACAA AGATATAGAA AAACGTGTTT TAAAAAGTGG AAAAATAATA
AGAAAGTTAA GACTTGACGA ACTGCCTCAA TTTTTGAATA TAATAAAAGG GAATATGTCT
ATTGTAGGTC CCAGGCCAGA AATGCTGGAG TTTCATAACA TGATGTCAAA CCGAATTCCT
TTCTACAATT ACAGACTCAA ACTAAACCCA GGAATAACCG GTTGGGCTCA GATACACTAC
AAGCATACAT CAACCCTTGA AGAATACATA AAAAAAACAG AATATGATCT GTATTACATA
AAAAATCAAA ATATTCTTCT GGACATTAAA ATAATGTTTA AAACTCTTGA AACAATAGTA
GGAATGAGGG GGACAAGGTG A
 
Protein sequence
MQKAAIHLLD ISLIFIMNTF LLNLPITISS ITSLIIYLGI YSFRTYDTET MKSYTESLIK 
TTVGTLVSFI VILIIYFFLG KYFNRYFFLS NLLYTITLLP IIHKIEYNIY KKYMPVKNYL
VIGRKEEIGN IMEEISEKSL NKIKFTQYIN PNPVTLDEII KQNTQKTLTQ TLHGIVITDP
ELEERVKPQI QNYKAEGLEI QYLPNMVEKY LKRIPIEVAQ SFKEYYEIVF QNVQPSPSQK
IIDKFFGTLL LILFSPFMLI ISLAILIEDG KPIIYKQKRM GKDEQIFIIN KFRSLKEAEI
DPNDPNKDIE KRVLKSGKII RKLRLDELPQ FLNIIKGNMS IVGPRPEMLE FHNMMSNRIP
FYNYRLKLNP GITGWAQIHY KHTSTLEEYI KKTEYDLYYI KNQNILLDIK IMFKTLETIV
GMRGTR