| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0514 |
|---|
| Symbol | |
|---|
| ID | 5758520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 558441 |
|---|
| End bp | 559670 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641301713 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001567571 |
|---|
| Protein GI | 160901990 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGAA ACATAGGATT GGTTCTTTTT TTGGTTGTCA TGTTTTCTTT GGCGATGGCA
GTAGATCCTA TTAAAATCGG CGCTGTAAAT CCTTTAGGAG ATATAACTGG CAACCAAAGT
ACAAAGGCGA TGAGGTTAGC AGTTAAAGAG ATTAACGACG CCGGTGGGGT TTTGGGAAGA
CCGCTGGAAC TTATAGTTAT AGATGATGAA ATGAATCCAG CAAAAGGGGC TGCAGCGATC
GAGAGATTAG CAACCGTTGA AAAAGTAGAT TTTTTTGTTG GTGGAATGTC TAGTGGTGTA
CATTTAGCAC AAGTGCCTAT TCTTAAAAAA TACCAAAAAA TAACTGTTTG GGCAGGTGGA
GCTTCCCATC AAATTGAAAT AGCGATGGGT CCAGATGCAG ACTGGTACTT CCATCTTCAC
CCATGGGATT ATCAACAAGG CGAAGGTTAT GGGATAGGTT GGAGAGAAAT AGTTCAGGCA
TATCCAAATG TTGATATTAA AAAAATCTTT TTGGCGTATG AAGAAGGAGC CTTCGGCACG
GACTCATATA CAGCTTATTT AGATCTTTAT GAGTTAGCAA AAAAAGGAGA AGGTCCATGG
CAAGGAATAA TGGAAGAATT TGCTGGAGCT TCATTCAAGA GTGCCGCCCT AGGAGGGGGA
GATTATAGAG CTATGTTAAA TCAAGCAAAG GCTTTTGATC CGGACCTTTT TGTTTGGGCG
GGATACGACG CTGATGCTAT ACCAATTGTA GCCCAGGCAA AAGAAGTGGA TTTCACACCT
GACTTGTTAG TAGGAGCTCC TCCAGGTTGG CCAGCGGACT TTGGGAAAAA TCCTTTAGCA
GAGAATGTTA TTCTTTATGG GATGTGGGCT CCAACTTTAA ATGATGTAAG TCCAGTAGCT
AAACATTTTT ATGATGCTTA CGTTGAAATG TGGGATGAAG AACCGGTAAC ATACTTTGCT
CCCCTTGGAT ATACTAATAT TTATTTTTTG GTTGAAGGTA TAAAAAAAGC AGGAACCATG
GATAAAGAAG CTATAATTTC TGCATTGAGA ACTATTGAAT ATGAATCGCC GTTGGGTGAA
GTGTTGAAAA TTGAACCAAG CAGAATAATA CCAAATCAAG GATTCAAGTA TCAAAAAATT
TTACAATGGC AAAATGGTAG ACAAGAAGTT ATTTGGCCTA TAGATCTTGC AACGGCAACG
ATGGCTTATC CTTTCACATT TGGTAAATAG
|
|---|
| Protein sequence | MKRNIGLVLF LVVMFSLAMA VDPIKIGAVN PLGDITGNQS TKAMRLAVKE INDAGGVLGR
PLELIVIDDE MNPAKGAAAI ERLATVEKVD FFVGGMSSGV HLAQVPILKK YQKITVWAGG
ASHQIEIAMG PDADWYFHLH PWDYQQGEGY GIGWREIVQA YPNVDIKKIF LAYEEGAFGT
DSYTAYLDLY ELAKKGEGPW QGIMEEFAGA SFKSAALGGG DYRAMLNQAK AFDPDLFVWA
GYDADAIPIV AQAKEVDFTP DLLVGAPPGW PADFGKNPLA ENVILYGMWA PTLNDVSPVA
KHFYDAYVEM WDEEPVTYFA PLGYTNIYFL VEGIKKAGTM DKEAIISALR TIEYESPLGE
VLKIEPSRII PNQGFKYQKI LQWQNGRQEV IWPIDLATAT MAYPFTFGK
|
|---|
| |