| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0453 |
|---|
| Symbol | |
|---|
| ID | 5757341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 487530 |
|---|
| End bp | 489491 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641301652 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_001567512 |
|---|
| Protein GI | 160901931 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAA ATAAAAACGA TAAAGAAAAT AAAAACGATA AAGAAAATAA AAACACCAAA
GAAGAAAAAA AGAAAGTAAA GTTTTCCAAC ATAATTTGGG TTTATATTAT ATTTGCGGTT
TTTTTTATTG GGGCTCTCAT TTCTTTGAAT TGGGAAAATA ATCCTATAAT ATCCTATTCA
GAAATGTTGA GTTTGATCAA TGATGGCCAG GTTGAATCCA TGAAAATAAA CCAAAATGGA
AACGTGGAAA TACTTAGCAA AGACGGTACT ACTTATGAAT CTTTTTCGCC AGCTTTAGTA
ATCGATAAAC AGTATGTGAA TAGTTTAATT CAAAAAGGTA TAAAGGTAGA GTATGTTGAA
AGTGTTGGGA CAAAGTGGTG GTTTGGTTTA TTGATAAACA TAATTCCAAT AGTAGTAATG
GTTCTTTTCT TTTTTTGGTT GTATCGTTCG GCTTCCGCAG GAGCTAGAAG CAGTATGAAC
TTTGGAAAGA GTGGGGCAAA AAAGTATGAA CCTATCGGGG AAAAAGTTAC CTTTAAAGAT
GTGGCAGGAA TCGATGAAGT TTTGGACGAA ATCGAGGATA TTGTAAAATT TTTGAAAAAC
CCTCAAGAAT TTCAAGAATT GGGTGCAAGA ATGCCTAAAG GAACTTTGTT GGTAGGCCCT
CCGGGAACTG GTAAAACTTT GACAGCAAGG GCTATAGCCG GAGAAGCAGA TGTACCTTTT
TATTATGCAA GTGGATCTGA TTTTGTCGAA CTTTTTGTAG GGGTTGGTGC ATCGCGAGTT
AGAGACCTTT TTAAAACAGC TAAAGAAAAT GCTCCTGCAA TAATATTTAT CGATGAATTA
GACGCAGTAG GTAGACAAAG AGGAGCTGGC CTTGGTGGAG GGAACGATGA GAGAGAACAA
ACTCTCAATG CCTTGTTAGT AGAACTCGAT GGTTTTGACA CGTCGACAGG GGTTGTTGTC
ATGGCTGCTA CCAATAGGCC TGATGTTCTT GATAAAGCAT TGCTTAGACC AGGTAGGTTT
GATAAAAAAA TAATGGTAGG TCCTCCAGAT GTAAAAGGAA GAGAAGAAAT TTTAAAGATA
CATACACGTA AAAAGAAAAT AGCCCCTGAT GTTGATTTAA AATTGTTAGC CAAAAGGACA
CCGGGCTTCG TTGGAGCTGA TTTAGAAAAC CTAGTTAATG AAGCTGCTTT AATAGCCTCA
AGAAAGAAAA AAAACCAAGT AGAAATGAGT GATTTTGAAG AGGCTATTGA TAGGGTACTA
ACCGGTCCAT CAAAAAAGTA CAGGATAATA TCCGATAAAG AAAAGAAGAT TCTATCGTAT
CATGAGTTGG GACATGCTGT ATTGGCATAT TTATTGCCTA ATACCGACCC TGTTTACAAG
ATTACTATAA TTCCTAGGGG TGCAGGTTCG TTAGGTTCTA CTTTACAAAT TCCTGAAAAA
GACAAATATT TAATTAAAAA ATCTGAAATA CTTGATAGGA TCGTTGTAGC CCTTGGAGGG
AGAGCTAGCG AGAAATTAGT GTTTAATTTT GCTACTACCG GTGCTAAAGA TGATCTGAGA
AAAGCTACAG ATTATGCAAA ATCCATGATT TATAGGTTAG GAATGTCCAA AAGAATGGGC
CCTGTGTATT GGGAAGGAGA AGAGGAAGAA ATATTTTTGG GGAGTGAGTT GACAAAACAA
AGAAATTATT CGGAAGAAAC CGCAAAAGAA CTTGACGTTG AAGTCAAGAA AATAATTAAT
TCTATGTACG ATAAAGCTCT CGAACTTCTT AAGCAAAATA GAGAGAGGCT TGATCTTCTA
GCTTCTTATA TTTTTAAAAA TGAAACAATT TATGGGGAAG AATTCAAAAA GCTTATGAGT
AAAGACCTTG AAGAGTTAAA GGAATATATT GGGGGCGAAA AAGAAATAAA TGAATTTCTT
AAAATAGATG TTGTGAATCA TGTTAATTAT CAACCTGTGT AA
|
|---|
| Protein sequence | MPENKNDKEN KNDKENKNTK EEKKKVKFSN IIWVYIIFAV FFIGALISLN WENNPIISYS
EMLSLINDGQ VESMKINQNG NVEILSKDGT TYESFSPALV IDKQYVNSLI QKGIKVEYVE
SVGTKWWFGL LINIIPIVVM VLFFFWLYRS ASAGARSSMN FGKSGAKKYE PIGEKVTFKD
VAGIDEVLDE IEDIVKFLKN PQEFQELGAR MPKGTLLVGP PGTGKTLTAR AIAGEADVPF
YYASGSDFVE LFVGVGASRV RDLFKTAKEN APAIIFIDEL DAVGRQRGAG LGGGNDEREQ
TLNALLVELD GFDTSTGVVV MAATNRPDVL DKALLRPGRF DKKIMVGPPD VKGREEILKI
HTRKKKIAPD VDLKLLAKRT PGFVGADLEN LVNEAALIAS RKKKNQVEMS DFEEAIDRVL
TGPSKKYRII SDKEKKILSY HELGHAVLAY LLPNTDPVYK ITIIPRGAGS LGSTLQIPEK
DKYLIKKSEI LDRIVVALGG RASEKLVFNF ATTGAKDDLR KATDYAKSMI YRLGMSKRMG
PVYWEGEEEE IFLGSELTKQ RNYSEETAKE LDVEVKKIIN SMYDKALELL KQNRERLDLL
ASYIFKNETI YGEEFKKLMS KDLEELKEYI GGEKEINEFL KIDVVNHVNY QPV
|
|---|
| |