Gene Pmob_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0232 
Symbol 
ID5757304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp243155 
End bp243952 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content32% 
IMG OID641301430 
Productpolysaccharide deacetylase 
Protein accessionYP_001567299 
Protein GI160901718 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.621532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT CTTTCGGCTT TTATCCACAA GGTAAAATAA AGGCTTTAAC CATGAGTTAT 
GATGATGGAC AAATTTATGA CAGAAGATTG ATAAGGATCT TCAATAAGTA CGGAATCAAA
GGTACCTTCC ATTTAAATTC AGGAAAATTA GATTCAGAAC CATTTTTAAA CTCTTCCGAA
ATAAGGGATC TCTTTGAGGG GCATGAAGTT GCTATACATA CATTAAATCA CCCTTATCTC
ACAAGAGTAC CAAAGGAATC AATAATTGAG GAAATTATGG AGGATAGGGA AAGATTAGAG
TCTTTAGTAA ACTATCCAAT AAGGGGAATG TCATATCCTT ATGGGGATTA CGATGAAGAA
CTTTTAGAAT TACTTCCATA TTTGGGAATT GAATATTCAA GAACAGTTAG TTCCCATGGT
AACTTTTCTT TACCTACACA TTTTTTGAGG TGGAATCCTA CTTGTCATCA TGATGATAAC
TTGTTAAAAA AATATGAAGA ATTCAAGAAA TTAGAATCTA ACGAAACTAT GCCTTTGTTG
TATGTATGGG GACACAGTTT TGAATTTGAG AGAAATAATA ATTGGGATAT GATTGAAGAG
TTTTGCAAAA AAATATCGAA CGATGAAACA ATTTGGTATG CGACAAATGT AGAGATTGTG
GATTATTTGA AAGCTTTAAG GAATTTAAAG TTTAGTGTAA ATAAAAAAAT AGTTTATAAT
CCTTCTTCTT TAACAGTATG GATAGGAGTG GATGGTAATC CAGTGAAGGT AGAAGGTGGT
AGATATCTGA CTTTATAG
 
Protein sequence
MKISFGFYPQ GKIKALTMSY DDGQIYDRRL IRIFNKYGIK GTFHLNSGKL DSEPFLNSSE 
IRDLFEGHEV AIHTLNHPYL TRVPKESIIE EIMEDRERLE SLVNYPIRGM SYPYGDYDEE
LLELLPYLGI EYSRTVSSHG NFSLPTHFLR WNPTCHHDDN LLKKYEEFKK LESNETMPLL
YVWGHSFEFE RNNNWDMIEE FCKKISNDET IWYATNVEIV DYLKALRNLK FSVNKKIVYN
PSSLTVWIGV DGNPVKVEGG RYLTL