Gene Pmob_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0121 
Symbol 
ID5758065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp121120 
End bp122307 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content31% 
IMG OID641301322 
ProductIS605 family transposase OrfB 
Protein accessionYP_001567193 
Protein GI160901612 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTGC TAAAGAGCTA CAAAACAGAG ATAAATCCGA CGCTTGAACA AGAACAACAA 
ATTAAAAAAA CACTAGGTGT TTGTAGGTTT ATATACAATT TCTACATTGC ACATAACAAG
GAGATTTATG AAAAAGAAAG GCGATTTGTT TCGGGTATGG AGTTTTCAGT ATGGTTAAAT
AACGAGTTTA TACCGAACAG TCAAGAATTC AATTGGATAA AAGATGTATC GAGTAAAGCT
GTTAAACAAT CAATTATGAA TGGTGAAAGA GCTTTTAAAA AGTTTTTTAA AGGTAAATCA
AAATTTCCTA GATTCAAAAA GAAAAAGAAT AATGACGTTA AAGCCTACTT TCCTAGAAAT
AATAAAACTG ATTGGACGAT TGAAAGACAT AGAGTAAAAA TACCAACATT GGGATTTGTT
CGACTAAAAG AAAAAGGCTA CATCCCTACA AATGCTAAAG TTGGAAGTGG TTCAGTTTCT
TTTGAAGCAG GTAGATATTA TGTTAGCGTT CTTGTAGAAG AAGACAGCCT CACGGCAGTT
GAAAAAGGAA TAAAGCAAGA CAATATATCA TTCTCCGAAG GGATTGGTAT CGATGTAGGT
ATAAGAGAAT TTGTAGTAGC TAGTAACGGT ATTAAGAAGA AAAATATAAA TAAAAGCAAA
GAAATTAAAA AACTCGAAAA AAAACTTAAG CGTGAGCAGA GACGGTTATC AAAAAAATAC
GAAAATAAAA AGAAAGGAGG TACTGCCACA AATTCTGCAA AAAATATAGA CAAACAAGTA
TTAAAGGTCC AGAAACTTCA TCAAAAACTT AAAAACAAAC GTCATGACTA TGTGAATAAA
GTAGTTTGTG AACTGGTGAA AACCAAACCA GAATATTTCA CTATCGAAGA TTTGAATGTT
AAAGGAATGA TGAAGAATAG GCATTTATCA AAAGCAATTG CAAAACAGAA TTTCCACTAT
TTCAAGATTA GACTCGAAAA CAAATGTAAA CATTTAGGAA TTCAATTGAG GATAGTTTCA
AGATTTTATC CATCAAGTAA AATATGTTCT CATTGTGGTA ATATCAAGAA AGACCTAAGA
TTATCAGACA GAGTTTACAT TTGCGAAGAA TGTGGATCGA AAATAGATAG AGATTTGAAC
GCAGCAATTA ATCTGAAGAA TGCCAAAGAA TATGCGATAG CTTGTTGA
 
Protein sequence
MRLLKSYKTE INPTLEQEQQ IKKTLGVCRF IYNFYIAHNK EIYEKERRFV SGMEFSVWLN 
NEFIPNSQEF NWIKDVSSKA VKQSIMNGER AFKKFFKGKS KFPRFKKKKN NDVKAYFPRN
NKTDWTIERH RVKIPTLGFV RLKEKGYIPT NAKVGSGSVS FEAGRYYVSV LVEEDSLTAV
EKGIKQDNIS FSEGIGIDVG IREFVVASNG IKKKNINKSK EIKKLEKKLK REQRRLSKKY
ENKKKGGTAT NSAKNIDKQV LKVQKLHQKL KNKRHDYVNK VVCELVKTKP EYFTIEDLNV
KGMMKNRHLS KAIAKQNFHY FKIRLENKCK HLGIQLRIVS RFYPSSKICS HCGNIKKDLR
LSDRVYICEE CGSKIDRDLN AAINLKNAKE YAIAC