Gene Pmen_4568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4568 
Symbol 
ID5107026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5012719 
End bp5013444 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content71% 
IMG OID640505839 
Producthypothetical protein 
Protein accessionYP_001190047 
Protein GI146309582 
COG category[C] Energy production and conversion 
COG ID[COG3411] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG CCCCCTATGC CCGCGTTCTG TTCATCGGCC CCGGCCTTGG TCGTGGTGCC 
TCGGCCGAGC GTCTGCAGCA GCGCGTCGAA GCGCTGCTGG GCGAGGCGCA TCTGCATGAC
AGCGAGCAGG ATGGCTGCTG GCAGGCCATC GACCAGGCGC CGCGACCGCT GCTGGTGGTG
GATCTGGAGC CACGCGCCGA TGCCGCGCAC CGCGACTGGC TGCGCGAACG CATCGCCGAG
CGCGGCGACG GCGCCGAGGT GTTCGTGGTC TGCACGGCGC TGGAGGACAC CTGGCTCGAT
GGCCTGAGCG CACTGCTGGC GCATCGCGGA GCGCATCTGC CCTGCAGCGA TGTGCCGCCG
GTGCCGGCGC ATCACGCCTG GTCGCAGATT CCGCCGCATG CGCAGCGCCT GTTGTTGTGC
AACGGCCCGC GCTGCACGCG CAAGGGCGCG CTGGGCCTGT GGAAAACCCT GCGCCAGCGG
CTCAAGGCCG CTGGCAAGCT GGAGTGCGAC GGCGGCGTGC ATATCACCCG CAGCCAGTGC
CAGTTCCCCT GCGACCTGGG GCCGACCGCG AGCCTTTATC CACAGGGCGA GTGGTACGGC
ATCAGGGACG AGGCGGCGGT GATCCGCCTG GTCGATGAGC GTCTGGTGGC GGGCAGGGCG
CTGCCGGAGC TGCGCATCGA TGAGCCGGGC GGCGCCGGCG AGACAGGCAC GAACCCGCGT
CCTTGA
 
Protein sequence
MSQAPYARVL FIGPGLGRGA SAERLQQRVE ALLGEAHLHD SEQDGCWQAI DQAPRPLLVV 
DLEPRADAAH RDWLRERIAE RGDGAEVFVV CTALEDTWLD GLSALLAHRG AHLPCSDVPP
VPAHHAWSQI PPHAQRLLLC NGPRCTRKGA LGLWKTLRQR LKAAGKLECD GGVHITRSQC
QFPCDLGPTA SLYPQGEWYG IRDEAAVIRL VDERLVAGRA LPELRIDEPG GAGETGTNPR
P