Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4568 |
Symbol | |
ID | 5107026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 5012719 |
End bp | 5013444 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640505839 |
Product | hypothetical protein |
Protein accession | YP_001190047 |
Protein GI | 146309582 |
COG category | [C] Energy production and conversion |
COG ID | [COG3411] Ferredoxin |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG CCCCCTATGC CCGCGTTCTG TTCATCGGCC CCGGCCTTGG TCGTGGTGCC TCGGCCGAGC GTCTGCAGCA GCGCGTCGAA GCGCTGCTGG GCGAGGCGCA TCTGCATGAC AGCGAGCAGG ATGGCTGCTG GCAGGCCATC GACCAGGCGC CGCGACCGCT GCTGGTGGTG GATCTGGAGC CACGCGCCGA TGCCGCGCAC CGCGACTGGC TGCGCGAACG CATCGCCGAG CGCGGCGACG GCGCCGAGGT GTTCGTGGTC TGCACGGCGC TGGAGGACAC CTGGCTCGAT GGCCTGAGCG CACTGCTGGC GCATCGCGGA GCGCATCTGC CCTGCAGCGA TGTGCCGCCG GTGCCGGCGC ATCACGCCTG GTCGCAGATT CCGCCGCATG CGCAGCGCCT GTTGTTGTGC AACGGCCCGC GCTGCACGCG CAAGGGCGCG CTGGGCCTGT GGAAAACCCT GCGCCAGCGG CTCAAGGCCG CTGGCAAGCT GGAGTGCGAC GGCGGCGTGC ATATCACCCG CAGCCAGTGC CAGTTCCCCT GCGACCTGGG GCCGACCGCG AGCCTTTATC CACAGGGCGA GTGGTACGGC ATCAGGGACG AGGCGGCGGT GATCCGCCTG GTCGATGAGC GTCTGGTGGC GGGCAGGGCG CTGCCGGAGC TGCGCATCGA TGAGCCGGGC GGCGCCGGCG AGACAGGCAC GAACCCGCGT CCTTGA
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Protein sequence | MSQAPYARVL FIGPGLGRGA SAERLQQRVE ALLGEAHLHD SEQDGCWQAI DQAPRPLLVV DLEPRADAAH RDWLRERIAE RGDGAEVFVV CTALEDTWLD GLSALLAHRG AHLPCSDVPP VPAHHAWSQI PPHAQRLLLC NGPRCTRKGA LGLWKTLRQR LKAAGKLECD GGVHITRSQC QFPCDLGPTA SLYPQGEWYG IRDEAAVIRL VDERLVAGRA LPELRIDEPG GAGETGTNPR P
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